Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1590 ATGGACAAAGCTTCTGTGCTTGGAGATGCTATAAAGTACATGAAACAACTGCAAGAGAAAGTGAGGATTCTTCAGGAGGAACAAACAAAGGCTAAAACAGTGGAGTCTGTAGTGATTGTGAGGAAATCTCAGTTTATTGCTTCGGACTCTAATTCTTCAGATAATTTTGGTGGTGGAGGAGGATCATCATCATCATCTTTCAATGATGACACAGTGCTGCCAGAAATTGAAGCAAGGTTCTGTGAAAGAAGCGTGCTCATAAGAATTTATTGTGAGAAAACCAAAGGAGTTCTGGAAAAAGCTATTGGTATGATTGAGGATCTCCATTTAACAGTCACCAATACCAGTTCCTTCACTTTTGGGAGTGCTTCTCTTGATATCACAATAATTGCTCAGATGGATTCAGAATTTTGCATGACACTGGATGATCTTGTGGGAAACCTTCGCTCAGCCTTTAAATCTTTCATGAGTTCAAATATGGAGATTTCACACACCACCAAAGGATTACCTGATGATCAACTGGCAATAACATTGGAGGATCCTGCTAGTTATCTTAATGAGTGGCATTATCACTTGAACGCTTATGAGGATCCAACCTTACTACCCATAGCTTCTGCTTTTGGAGAGACATTATTATTACAGCAACACTCATTCTGTAATAATATGATGAATCCAAACTCCTTTGATCCCAAAATTACCAGTTATTGCATGCAAACTTCTTCAGCTTCCATCAATGAAGAAAGACCCACAAAGCTTATCAAAACCAACAAGACTACATCATGTCGGAGTCCCAATAATAACAATAACAATAATATGCTTGCCTACTGTCCAGACCAGCTTCAATTTGCTTCGTGTCCAAACTTTCTTTCCTTTGTGAACCAAAACTACATAAATCATGAGATGGGATTAATGGGGAAGGCCACCAATAATGAGGATGAGACAACATTATCATCTCGAAAAGTCAATGGAACCAATAATAATGTTGATGATGATCATGTTTTGATGATGTCTCAAGAATCCTTGGGGGATCCAAACTATTATGGGTTAAAGACGCCAAGCCAATTAGAACAGCAGGCAAGGGAGATTAATGGAGCTATTATGAGTCCTAATAATAATAACAGAGTTTCTAATCAACCAGTTCATGATCACATCATTGCTGAAAGGAAACGAAGAGAAAAGCTTAGCCAAAGTTTCATTGCTCTCTCTGCCCTTGTTCCTGGTCTTAAGAAGATGGACAAAGCTTCTGTGCTTGGAGATGCTATAAAGTACATGAAACAACTGCAAGAGAAAGTGAGGATTCTTCAGGAGGAACAAACAAAGGCTAAAACAGTGGAGTCTGTAGTGATTGTGAGGAAATCTCAGTTTATTGCTTCGGACTCTAATTCTTCAGATAATTTTGGTGGTGGAGGAGGATCATCATCATCATCTTTCAATGATGACACAGTGCTGCCAGAAATTGAAGCAAGGTTCTGTGAAAGAAGCGTGCTCATAAGAATTTATTGTGAGAAAACCAAAGGAGTTCTGGAAAAAGCTATTGGTATGATTGAGGATCTCCATTTAACAGTCACCAATACCAGTTCCTTCACTTTTGGGAGTGCTTCTCTTGATATCACAATTATTGCTCAGATGGATTCAGAATTTTGCATGACACTGGATGATCTTGTGGGAAACCTTCGCTCAGCCTTTAAATCTTTCATGTGA 1701 0.3886 MDKASVLGDAIKYMKQLQEKVRILQEEQTKAKTVESVVIVRKSQFIASDSNSSDNFGGGGGSSSSSFNDDTVLPEIEARFCERSVLIRIYCEKTKGVLEKAIGMIEDLHLTVTNTSSFTFGSASLDITIIAQMDSEFCMTLDDLVGNLRSAFKSFMSSNMEISHTTKGLPDDQLAITLEDPASYLNEWHYHLNAYEDPTLLPIASAFGETLLLQQHSFCNNMMNPNSFDPKITSYCMQTSSASINEERPTKLIKTNKTTSCRSPNNNNNNNMLAYCPDQLQFASCPNFLSFVNQNYINHEMGLMGKATNNEDETTLSSRKVNGTNNNVDDDHVLMMSQESLGDPNYYGLKTPSQLEQQAREINGAIMSPNNNNRVSNQPVHDHIIAERKRREKLSQSFIALSALVPGLKKMDKASVLGDAIKYMKQLQEKVRILQEEQTKAKTVESVVIVRKSQFIASDSNSSDNFGGGGGSSSSSFNDDTVLPEIEARFCERSVLIRIYCEKTKGVLEKAIGMIEDLHLTVTNTSSFTFGSASLDITIIAQMDSEFCMTLDDLVGNLRSAFKSFM 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1590 566 PANTHER BHLH TRANSCRIPTION FACTOR 224 563 - -
Mibi03g1590 566 Pfam Helix-loop-helix DNA-binding domain 383 428 IPR011598 GO:0046983
Mibi03g1590 566 Coils Coil 7 34 - -
Mibi03g1590 566 SMART finulus 384 433 IPR011598 GO:0046983
Mibi03g1590 566 Coils Coil 417 444 - -
Mibi03g1590 566 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 382 440 IPR036638 GO:0046983
Mibi03g1590 566 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 378 427 IPR011598 GO:0046983
Mibi03g1590 566 CDD bHLH_AtNAI1_like 382 453 - -
Mibi03g1590 566 Gene3D - 370 443 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1590 Mibi-ChrMibi03 42700103 42712271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1590 382 566 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 57.297 1.79e-57 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi03g1590 HLH 9.2e-10 No_clan