Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1582 ATGGCTTCTTCAAGCACTGATTATTCTATAAAGAGCAAAGTTAAAAGGCCAATTGAAGCCAACACTTCAAAGTTGCAGCACAGAAAGGGAGCTTGGATACAACAAGAAGATGCCAAACTAGCTGAAGCCATCGCAGTTCATGGTGCAACAAGGTGGAACTCCATTGCAGCTAGAGCAGGTCTGAATAGGAGTGGTAAGAGTTGCAGGCTAAGATGGTTCAACTATCTGAGACCTAATATCAAGAGGGGAAATATATCAGAGCAAGAAGAGGATTTGATACTTCGACTCCACAAACTCCTCGGAAACAGGTGGTCTTTGATTGCTGGAAGGATACCAGGACGAACAGATAATGAGATAAAGAACTATTGGAATTCTCATTTGAGCAAGAAAATGAAACAGATGAATAAGGAGAAGAAGCAAATAGGGTTTTCAACAGTTCGAGAATACCACAAAGACGAAGGGGTCGTGATGATGGTGGAAGAGACCAACATTCCTGCAGAGGTATCAGAGCCAGCAATACAAGAGAATATTCCAAATGAAGAAGAAAGTGAAGAATATTTAACTAAGTGCGATTTTTACGAGAAATGGTTATTATCTGATTTTTTTGATGAGGGTCCGTTGAATTTGGAGTGGGTTAGCAAATTCCTCGAATTCAGAGATTGTTTGGATTAA 672 0.4018 MASSSTDYSIKSKVKRPIEANTSKLQHRKGAWIQQEDAKLAEAIAVHGATRWNSIAARAGLNRSGKSCRLRWFNYLRPNIKRGNISEQEEDLILRLHKLLGNRWSLIAGRIPGRTDNEIKNYWNSHLSKKMKQMNKEKKQIGFSTVREYHKDEGVVMMVEETNIPAEVSEPAIQENIPNEEESEEYLTKCDFYEKWLLSDFFDEGPLNLEWVSKFLEFRDCLD 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1582 223 CDD SANT 31 76 IPR001005 -
Mibi03g1582 223 Gene3D - 29 81 - -
Mibi03g1582 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 131 IPR017930 -
Mibi03g1582 223 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 24 157 - -
Mibi03g1582 223 ProSiteProfiles Myb-like domain profile. 24 76 IPR001005 -
Mibi03g1582 223 FunFam Myb transcription factor 29 81 - -
Mibi03g1582 223 CDD SANT 86 127 IPR001005 -
Mibi03g1582 223 Pfam Myb-like DNA-binding domain 82 127 IPR001005 -
Mibi03g1582 223 Pfam Myb-like DNA-binding domain 29 76 IPR001005 -
Mibi03g1582 223 Gene3D - 85 152 - -
Mibi03g1582 223 ProSiteProfiles Myb-like domain profile. 77 127 IPR001005 -
Mibi03g1582 223 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 76 IPR017930 -
Mibi03g1582 223 SMART sant 28 78 IPR001005 -
Mibi03g1582 223 SMART sant 81 129 IPR001005 -
Mibi03g1582 223 SUPERFAMILY Homeodomain-like 27 123 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1582 Mibi-ChrMibi03 42484956 42486375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1582 26 131 MYB Transcription Factor Family AT5G40330 64.151 5.44e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mibi03g1582 Myb_DNA-binding 1.8e-15 CL0123