Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1551 ATGATTCTTCACAAATGTTTCTTACTCCTCTTTTTCCTCCTCCTCTCTTCTGCCACCATTGATGCACAACCTTCTTACCTTTACCATAATTGCTCCACAGGAAAAAACTTCTCTTCTAATAGCACCTTCAAATCCCACCGTACCACCCTCCTCTCCTCCTTAACTTCCACCAATGTCACCTTCCAAAACGCCACCGTTCCACGTGGCAGCCACGGCGGCGACGCCATCTACGGCCTCTTCATGTGTCGCGGTGATGTCTCTCTTCCTGTTTGTCACCAATGCATCGTCAATGCAACCCAACGGCTACCTTCTGAGTGTCCATTTTCGAAGGAGGCTATAATATGTGAGGGGAAGACTGGAGGAAGAGGTGTGAATCCAAGTTGCAACATTCGTTATGAGTTTTTTTCTTTCTTTGATCAGATAAATGCCCCGACACTGGCACCGGCACCGGCACCGACACCGGCATTAGCACCGATAACGGCACCGGCGTTGACTCCAATACCGGATCCATTTTTCCCTCGAACCAATTCTTCACATCATCCTCCACCTCGACCAACAGCAAGGACAATTGTGATAGTTGTGGCTTCTCTTGTTGTTGGCGGGATAACTTTTTATTTAGCTTACTATCTCTTTAAGATTCGAATGAAGAAGAGTCGCAGGGCTATTCTCAGACAACAATACTTTGGAATGGAAAGCACAACTTTAGAGCACCTGCAATTTAATCTAGCTACAATTGAGGCTGCGACAAATAAGTTTTCTCATGAGAATAGTTTAGGGAGAGGTGGATTTGGGCAAGTTTTCAAGGGTATTCTTTCAAGTGGTCAAGAAATAGCTGTGAAGAGACTTTCAAAAGGCTCTGGCCAAGGTGCAGAAGAGTTTAAGAATGAGGTTTTATTAATAGCTAGACTCCAACACAGAAATTTGGTGGCTTTATTAGGATTTTGCATTGAAGAGCAGGAGAAACTACTTGTTTATGAATATGTCCCCAACAGAAGCCTTGATCACTTTTTATTTGGCTCGCAAAATGGCAAAACCTTAGATTGGATGGAGCGAAGCAAAATCATAGGAGGAATTGCTCGAGGAATTCTTTATCTTCATGAACATTCTCGTCTAAAAATCATACATCGAGATCTCAAACCTAGCAATATTTTGCTAGATGATGAAATGAATCCAAAAATTTCAGATTTTGGTCTAGCTAAGATGGTTGCTATAAGTGAAAATGAGGGAAGTACAAATCGCATTGTTGGAACATATGGTTATATGTCTCCAGAGTATGCAATGTTTGGACAATATTCTGAAAAATCAGATGTTTTTAGCTTTGGAGTTATAGTTTTAGAAATTATCAGTGGCAAAAAGAATACCGGTTGTCATGATTCCCAATATGCTGATGGCCTCTTAAGCTATACTTGGAAACGATGGAGGGATGACAATATGGTAGAGATATTGGATTCAAATATAAATGAATTGGGATCATACAATGAAGTGATCAAGTGCATCCAAATTGGTTTGTTATGTGTTCAAGAAAATCCAAATACAAGGCCATCCATGGCTACGGTTGTTTCATATCTTAGCAATGATCCTGTTCAGTTGCCCTTACCTCAGGAACCTGCATTCTTTTTGCATGGTCAACCAGTGCCTATCATTACCAATACAAGCGGAGAATCACGCTCTATTAATGAAGCTTCTATGAGTGAATTTTTTCCTCGCTAA 1710 0.4123 MILHKCFLLLFFLLLSSATIDAQPSYLYHNCSTGKNFSSNSTFKSHRTTLLSSLTSTNVTFQNATVPRGSHGGDAIYGLFMCRGDVSLPVCHQCIVNATQRLPSECPFSKEAIICEGKTGGRGVNPSCNIRYEFFSFFDQINAPTLAPAPAPTPALAPITAPALTPIPDPFFPRTNSSHHPPPRPTARTIVIVVASLVVGGITFYLAYYLFKIRMKKSRRAILRQQYFGMESTTLEHLQFNLATIEAATNKFSHENSLGRGGFGQVFKGILSSGQEIAVKRLSKGSGQGAEEFKNEVLLIARLQHRNLVALLGFCIEEQEKLLVYEYVPNRSLDHFLFGSQNGKTLDWMERSKIIGGIARGILYLHEHSRLKIIHRDLKPSNILLDDEMNPKISDFGLAKMVAISENEGSTNRIVGTYGYMSPEYAMFGQYSEKSDVFSFGVIVLEIISGKKNTGCHDSQYADGLLSYTWKRWRDDNMVEILDSNINELGSYNEVIKCIQIGLLCVQENPNTRPSMATVVSYLSNDPVQLPLPQEPAFFLHGQPVPIITNTSGESRSINEASMSEFFPR 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1551 569 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 66 554 - -
Mibi03g1551 569 FunFam cysteine-rich receptor-like protein kinase 10 328 530 - -
Mibi03g1551 569 SUPERFAMILY Protein kinase-like (PK-like) 235 553 IPR011009 -
Mibi03g1551 569 Pfam Salt stress response/antifungal 31 133 IPR002902 -
Mibi03g1551 569 CDD STKc_IRAK 258 523 - -
Mibi03g1551 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 373 385 IPR008271 GO:0004672|GO:0006468
Mibi03g1551 569 ProSitePatterns Protein kinases ATP-binding region signature. 258 280 IPR017441 GO:0005524
Mibi03g1551 569 ProSiteProfiles Protein kinase domain profile. 252 538 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1551 569 Gene3D - 23 137 IPR038408 -
Mibi03g1551 569 SMART serkin_6 252 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1551 569 Gene3D Phosphorylase Kinase; domain 1 213 327 - -
Mibi03g1551 569 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 213 327 - -
Mibi03g1551 569 Gene3D Transferase(Phosphotransferase) domain 1 328 529 - -
Mibi03g1551 569 Pfam Protein kinase domain 253 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1551 569 ProSiteProfiles Gnk2-homologous domain profile. 25 137 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1551 Mibi-ChrMibi03 41303252 41307384 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1551 69 569 Receptor kinase-like Gene Family AT4G21410 44.834 9.41e-141 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g1551 Pkinase 2.3e-48 CL0016