Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1549 ATGATTCTTCACAAATACTTCTCACTCTTCCTCCTCCTTACCATTATCTTCCTCTCTTCTACCACCATTGATGCACAACCTAATTATCTTTACCACAACTGCTCCTCCACCGGAAAAACCTTCTCTACTAATAGTACCTTTCAATCTAGCCGAGCCACCCTCTTCTCCACCCTAGCTTCCACCAAAGCCGGTTTCTCTAACGCCACCCTTCCTGCCGGCCGTGACACAATCTATGGCCTCTTCATGTGCCGTGGTGATGTCTCTCTTCCGATTTGCCACCAATGCATCGTTAACGCAACCCAACGGCTACCTTCTGAGTGTCCATCATCGAAGGAGGCTATAATATGGTACGATGAGTGCATGCTTCGCTATTCCAACACATCTTTCTTCTCCATCATTGACAAATGGCCAACCGTCGTTATGTTGACCCCGAAGAATGTCTCCGGTTCGAATCCGGCTAGATTCCAGAGTTTTCTTCTTAATTTTATGAATGACACGGCAAGTAAGGTGGAGGTGGGGGCGAAAATTGCGCCGGAGGGGAAGAATTATGTGAAGAACCAAGCGAATTTTGAGAATAAAACTGTGTATAGTCTTGCTCAGTGCACGCCTGACCTATTGCTTGAAGATTGTAGAAGTTGTTTGAGTGGTGTGATTCGGAATATTCCGATGTGTAGTGATGGGAAGACAGGAGGAAGGGCTGTGAATCCAAGTTGCAACATTCGTTATGAGTTGTTTTCATTCTTTGATTCTGATCAACCAGTCGTGCCTATGGGATCAATTCCATTTTTCCGTCGGCTTCCCGCAAGGATTATTGGGATAGTTGTGGCTTCTCTTTTAGTTGGTGGAATAATTATGTATTTCTCTTACTACCTCTTGAAGATTCGAATGAAGAAGAGTCATAGGGCTATTCTCAGACAAAGATATTTTGGAAGGGAAAGCACAACTTTAGAGCATCTGCAATTCAGTCTAGCTATAATCGAGGCTGCGACAAATAAGTTTTCTCATGAAAATAGTTTAGGGAGAGGTGGATTTGGACAAGTTTTCAAGGGTATCCTTTTAAATGGCCAAGAAATAGCTGTGAAGAGGCTTTCAAAAAGTTCTGGTCAAGGTGCAGACGAGTTTAAGAACGAGGTTTTGTTGATTGCTAAACTCCAGCACAGAAATCTGGTGACATTATTAGGATTCTGCATTGAAGAGCAAGAGAAACTACTTGTTTATGAATATGTTCCTAACAGAAGCCTGGATTACTTTTTATTTGGTTCTGAAAACAGCAGAATATTAGATTGGATGGAGCGTAGCAAAATCATAGGAGGAGTTGCTCGAGGAATTCTTTATCTTCATGAATATTCTCGCCTAAAAATCATACATAGAGATCTCAAACCTAGCAATATTTTGTTAGATAATGAAATGAATCCAAAAATTTCAGATTTTGGCCTAGCTAAGATGGTTGCTATTACTGAAAATGAAGGAAGCACAAATCGAATTGTTGGAACCTATGGATATATGTCTCCAGAGTATGCAATGTTTGGACAATATTCTGAAAAATCAGATGTTTTTAGTTTTGGAGTTATAGTTTTAGAAATTATCAGTGGAAAGAAGAATACAAGTCATCATGATTCACATTCACAATATGCTGATGGTCTCTTAAGCTATACTTGGAAACGATGGAGAGATGACAAGTTGTTGGAGATATTCGATTCAAATATAAATGAATATGGATCATACAATGAAGTGATCAAGTGCATCCAGATTGGTTTGTTATGTGTTCAAGAAAATCCAAATACAAGGCCTTCCATGGCCACAGTTGTTTCATATCTCACCAATGATTTTGTTCAATTGCCCTTACCTCAGGAACCTGCATTCTTTTTGCGTGTTAAACCAGCTGAGCCTATTAGCACCAATGCAAGCGGAGAATCATGCTCTATTAATGAAGCTTCGATGAGTGAATTCATTCCTCGCTAA 1962 0.4027 MILHKYFSLFLLLTIIFLSSTTIDAQPNYLYHNCSSTGKTFSTNSTFQSSRATLFSTLASTKAGFSNATLPAGRDTIYGLFMCRGDVSLPICHQCIVNATQRLPSECPSSKEAIIWYDECMLRYSNTSFFSIIDKWPTVVMLTPKNVSGSNPARFQSFLLNFMNDTASKVEVGAKIAPEGKNYVKNQANFENKTVYSLAQCTPDLLLEDCRSCLSGVIRNIPMCSDGKTGGRAVNPSCNIRYELFSFFDSDQPVVPMGSIPFFRRLPARIIGIVVASLLVGGIIMYFSYYLLKIRMKKSHRAILRQRYFGRESTTLEHLQFSLAIIEAATNKFSHENSLGRGGFGQVFKGILLNGQEIAVKRLSKSSGQGADEFKNEVLLIAKLQHRNLVTLLGFCIEEQEKLLVYEYVPNRSLDYFLFGSENSRILDWMERSKIIGGVARGILYLHEYSRLKIIHRDLKPSNILLDNEMNPKISDFGLAKMVAITENEGSTNRIVGTYGYMSPEYAMFGQYSEKSDVFSFGVIVLEIISGKKNTSHHDSHSQYADGLLSYTWKRWRDDKLLEIFDSNINEYGSYNEVIKCIQIGLLCVQENPNTRPSMATVVSYLTNDFVQLPLPQEPAFFLRVKPAEPISTNASGESCSINEASMSEFIPR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1549 653 Pfam Salt stress response/antifungal 34 126 IPR002902 -
Mibi03g1549 653 Pfam Salt stress response/antifungal 151 243 IPR002902 -
Mibi03g1549 653 SMART serkin_6 333 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1549 653 ProSiteProfiles Protein kinase domain profile. 333 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1549 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 454 466 IPR008271 GO:0004672|GO:0006468
Mibi03g1549 653 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 129 - -
Mibi03g1549 653 ProSitePatterns Protein kinases ATP-binding region signature. 339 361 IPR017441 GO:0005524
Mibi03g1549 653 CDD STKc_IRAK 339 608 - -
Mibi03g1549 653 ProSiteProfiles Gnk2-homologous domain profile. 29 129 IPR002902 -
Mibi03g1549 653 Gene3D Phosphorylase Kinase; domain 1 295 408 - -
Mibi03g1549 653 Gene3D Transferase(Phosphotransferase) domain 1 409 612 - -
Mibi03g1549 653 ProSiteProfiles Gnk2-homologous domain profile. 135 247 IPR002902 -
Mibi03g1549 653 FunFam cysteine-rich receptor-like protein kinase 10 409 613 - -
Mibi03g1549 653 SUPERFAMILY Protein kinase-like (PK-like) 316 633 IPR011009 -
Mibi03g1549 653 Pfam Protein kinase domain 334 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1549 653 Gene3D - 139 247 IPR038408 -
Mibi03g1549 653 Gene3D - 26 129 IPR038408 -
Mibi03g1549 653 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 66 636 - -
Mibi03g1549 653 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 294 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1549 Mibi-ChrMibi03 41290662 41295799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1549 7 624 Receptor kinase-like Gene Family AT4G05200 44.548 0.0 548
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g1549 Pkinase 1.2e-49 CL0016