Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1524 ATGAAACTTCCTTCATTTTACATTCTGCTTCTCCTGTCTGTGCTTTATCAATCGCTCCATTGTTGCTGCCAGCATGACCCTATCACAGACTGCTCTTACAACGATACAAGCAACGTAGCATATGACTGCAACGACGTCCAAAAGTCATGCACATCCTTTGTAATTTTCAGATCCAGCCCTCCCTACAATACCCCTCTAAGCATTGCCAATCATCTTGGCACTGAAGCATCCTCCATAGCCTCCATCAACAACATGTCAGGCAATACCATGCACATCCCTTCTAATCAAACTGTTATTGTTCCAATTGATTGTTCCTGTTTGGGTGGAATCTACCAACACTCTGCTTCTTATGCATTAAAGGCAGGTGACACCTACTTTTTGGTGGCCACCAATATTTATCAAGGCCTCACGAGTTGCCAGATTTTACTCCGGCAAAATTACTTTACCCCTATAAATCTCGCTGTGGGTAACCAACTTTCAGTTCCAATATTATGTGCTTGTCCCACTGCTGACCAGATCTCAAACGGGTTCTCCTTCCTGCTAGTTCATACAGTTATCTTTGGGGATACACTAAAGTCAATTGCACAGGCCTATGGTGCCGATCTACAAACTCTGATGAATGCTAACCAGTTGAGGTCAAACACACCTATCTATCCCCACACAACTCTCATAGTTCCCCTCAAACCCTCCTCTTGTAAACACAATCCGCATTTATTCTACTGCACCTGTTCATTCTTCCAGATATACCTTCCACATACAAGTGTCAACACTCTCGATTGTGATCTTATTCAAACTGATGCGCATCGTTTCCCCATCAAATTGGTTGCTTCCCTAGGTGTTGGTATTGGTGCTGGACTTTTGAGCTTATTTCTTTTGGGTAACAAGCTATACCAATGTCTAAAACAAAAGCATGAAAGAGTTCATAAGGAAAAATTGTTCAAGCAGAATGGTGGGCTCCTGCTACAAGAAAAGATGTCAAGTTACGAAAATGGAGGCAAAGCAAGACTTTTTACGGCGGAAGAGCTGGAACGAGCAACAGATAACTACAATCAAAGTAGGTTTCTTGGTCAAGGTGGGTTTGGAACTGTTTATAGAGGAATGTTACCCGATGGTACCATTGTCGCGGTTAAGAAAGCGAAAGAAATTGTGAGAAACCAGATTGAGACTTTCATCAATGAAGTGGTAATTCTATCCCAAATAGATCACAGGAACATTGTCAAACTCTTAGGTTGGTGTCTAGAGACTGAAGCTCCATTATTAGTATATGAATTTATTCCCAATGGAACACTTTCTCACCACATCCATAACCAGGAATGCGAAGCAAAGCTTTCATGGGACACTCGCCTCAGAGTTGCTTGTGAGGTAGCTGGGGCAGTGGCATATATGCATTCTGCAGCTTCCATTCCCATCTTCCATAGAGACATCAAGACTTCCAACATACTCCTGGATCATAAGTACAGTGCCAAAGTATCTGATTTTGGAACCTCCAGGTCAGTCCCAGATGATAGGACTCACTTAACCACAGTGGTCCAAGGCACTTTTGGGTACATTGATCCTGAATACTTCCAATCCAGTCAATACACAGATAAAAGTGATGTATATAGTTTTGGGGTTATACTCATAGAGCTTATTTCTGGAAGGAAACCCATTACCTTCTCAGAAGAAGATCAAGGTCAGAACCTTGTCGCAGGATTTATTTCATTGATGAAGAAGGACCAAGTTTATGAGATTTTAGATACTAGAGTTGTTCATGAAGGAAGCAGAGATGATATTCTTAGTGTTGCAAATCTAGCAAAGAGATGCGTGAGACTCAATGGGAAGAAGAGACCCACAATGCGAGAGGTTTCAGCAGAGCTAGAAGGGCTGAGAAAGACACAAAATTCTTTAGAGATCACTGATTGTTCTCTTGAGTTTACACATGATAGAAGATCAGCTACGAGTGCCACTTATTCTGAATCAGACCAAGAATCCACAGAAGAAAGCATGTCATTAATGTTCCAAATAGACTCCACACCCATCTGA 2022 0.4189 MKLPSFYILLLLSVLYQSLHCCCQHDPITDCSYNDTSNVAYDCNDVQKSCTSFVIFRSSPPYNTPLSIANHLGTEASSIASINNMSGNTMHIPSNQTVIVPIDCSCLGGIYQHSASYALKAGDTYFLVATNIYQGLTSCQILLRQNYFTPINLAVGNQLSVPILCACPTADQISNGFSFLLVHTVIFGDTLKSIAQAYGADLQTLMNANQLRSNTPIYPHTTLIVPLKPSSCKHNPHLFYCTCSFFQIYLPHTSVNTLDCDLIQTDAHRFPIKLVASLGVGIGAGLLSLFLLGNKLYQCLKQKHERVHKEKLFKQNGGLLLQEKMSSYENGGKARLFTAEELERATDNYNQSRFLGQGGFGTVYRGMLPDGTIVAVKKAKEIVRNQIETFINEVVILSQIDHRNIVKLLGWCLETEAPLLVYEFIPNGTLSHHIHNQECEAKLSWDTRLRVACEVAGAVAYMHSAASIPIFHRDIKTSNILLDHKYSAKVSDFGTSRSVPDDRTHLTTVVQGTFGYIDPEYFQSSQYTDKSDVYSFGVILIELISGRKPITFSEEDQGQNLVAGFISLMKKDQVYEILDTRVVHEGSRDDILSVANLAKRCVRLNGKKRPTMREVSAELEGLRKTQNSLEITDCSLEFTHDRRSATSATYSESDQESTEESMSLMFQIDSTPI 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1524 673 ProSiteProfiles Protein kinase domain profile. 349 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1524 673 CDD LysM 182 225 IPR018392 -
Mibi03g1524 673 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Mibi03g1524 673 Gene3D Phosphorylase Kinase; domain 1 321 424 - -
Mibi03g1524 673 ProSiteProfiles LysM domain profile. 181 225 IPR018392 -
Mibi03g1524 673 FunFam Wall-associated receptor kinase 2 320 424 - -
Mibi03g1524 673 FunFam Wall-associated receptor kinase 2 425 641 - -
Mibi03g1524 673 CDD STKc_IRAK 355 622 - -
Mibi03g1524 673 Pfam Protein tyrosine and serine/threonine kinase 352 619 IPR001245 GO:0004672|GO:0006468
Mibi03g1524 673 SUPERFAMILY Protein kinase-like (PK-like) 328 619 IPR011009 -
Mibi03g1524 673 Pfam LysM domain 67 101 IPR018392 -
Mibi03g1524 673 Pfam LysM domain 183 226 IPR018392 -
Mibi03g1524 673 SMART LysM_2 182 226 IPR018392 -
Mibi03g1524 673 SMART LysM_2 116 162 IPR018392 -
Mibi03g1524 673 Coils Coil 612 632 - -
Mibi03g1524 673 SMART serkin_6 349 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1524 673 Gene3D Transferase(Phosphotransferase) domain 1 425 642 - -
Mibi03g1524 673 SUPERFAMILY LysM domain 181 226 IPR036779 -
Mibi03g1524 673 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 22 626 IPR045274 GO:0007166
Mibi03g1524 673 Gene3D LysM domain 179 235 IPR036779 -
Mibi03g1524 673 MobiDBLite consensus disorder prediction 643 662 - -
Mibi03g1524 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1524 Mibi-ChrMibi03 40614899 40617562 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1524 279 625 Receptor kinase-like Gene Family AT1G16130 55.301 5.16e-133 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mibi03g1524 Pkinase 5.8e-50 CL0016