Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1500 ATGGGTGAAGAATTTGAAGCTGGGATTTGTGGTGGGAATTATAATAATAGTAATAGTAATTACTGGTGGATCAACAACAACAACAACAACAACATGATGATGATGAATTCAGCAACAACGAGAAGTGTTTTCCCTTTGATGATCAGTTCTTCTCCTTGTTCTGTACTTGCTGCTAACACCGCGGATCTTCCAGGAGGAGGTATGATCGGCTACAGCTCATGGCAATCTGATACGGTGGACTTGAAGGCCCCGATGAGCAACACGACATCGTCTTGCTCTGATATCTCTCTGGGGTTTCTCGATGCGACCACGGCAACGGCCACGAAGCCGCTGCTTCAGGCGGCTGAAGCTGAGGCTGCTGTAGACAATCATAATCACCATAATAATGGTTCTATCTTGATGGATTCTTCTTCCTTGGATATGAATATGATCATGGCTTGGAATAATTCTCTCTTTGGTAATAATTCTTCATCACAAAGCCAAGATCAGAAGAGAGAGATGTCCACAAAGAATAATCAAGATTTATGTGGTGGTGGTGGTGGTGATTTTTCATCAGTTGGGTCATATGAATACCCTTGTGTTAACAATTCTTCAAGTGCATCATCAAAGTTGATTCAAAGTTTGTATGAAATTCCTCATCCTCAACCACAGTCACTTTTCACCAACCCATCGGCTTCCATGGCCTATTCTTCAATAAGTACACCAAATAATAATTATGGCCCCATATCTAATTCCTCTACTGATCAATTTACCACTACCACCACCACCACTTCTTCCTCTTCGTCTCCTTCTTCTTGGTCTAGACCCTCCAATAATAATAACAATAATAATAGTTCCTTCTTGAAGTCTAATGGTGGCGGCTTGCACTTCTCCAACTGTGCTCCTTTCTGGAATGCTTCTGTTGAAACGCCTCATGTTTTTGCTCCTTCAATCTCTGACAAACCCAATTTCACAAGCTCTCTCATATCCAAGGTACATATGTGTGTATATCTATATAGAGAAGAAGCTTCGGACTATGCTAAGAAAGCTTCGAGTGAACCTGCAATCAAGAAGCAAAGAATTGAAACCCCATCGCCATTACCAACTTTTAAGGTTCGGAAAGAGAAGCTAGGGGACCGAATCACTGCTCTTCAGCAATTGGTGTCGCCTTTTGGAAAGACTGATACTGCATCTGTTCTTCACGAAGCCATTGTGTACATCAAGTTCTTGCATGATCAAGTCAGTGTATGTTTTGAGCACTCCTTACATGAAGAATGGAGTTCCTATCCAACACTTCCAACAGGGTTGTGGTGTGAAGGATTCGTCAGAAGGGCGAAAACAAGACTTGAGAAGCAGAGGGCTGTGTTTGGTTCCGATTTCAAGCACATTCCCAATCACAAACGAAACCCCTGTGGACTTCTGGACACCATCATTTGGAGGGACACTCCTAAGATAAACAACTAG 1443 0.4248 MGEEFEAGICGGNYNNSNSNYWWINNNNNNNMMMMNSATTRSVFPLMISSSPCSVLAANTADLPGGGMIGYSSWQSDTVDLKAPMSNTTSSCSDISLGFLDATTATATKPLLQAAEAEAAVDNHNHHNNGSILMDSSSLDMNMIMAWNNSLFGNNSSSQSQDQKREMSTKNNQDLCGGGGGDFSSVGSYEYPCVNNSSSASSKLIQSLYEIPHPQPQSLFTNPSASMAYSSISTPNNNYGPISNSSTDQFTTTTTTTSSSSSPSSWSRPSNNNNNNNSSFLKSNGGGLHFSNCAPFWNASVETPHVFAPSISDKPNFTSSLISKVHMCVYLYREEASDYAKKASSEPAIKKQRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIVYIKFLHDQVSVCFEHSLHEEWSSYPTLPTGLWCEGFVRRAKTRLEKQRAVFGSDFKHIPNHKRNPCGLLDTIIWRDTPKINN 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1500 480 Gene3D - 364 422 IPR036638 GO:0046983
Mibi03g1500 480 MobiDBLite consensus disorder prediction 155 176 - -
Mibi03g1500 480 MobiDBLite consensus disorder prediction 155 175 - -
Mibi03g1500 480 CDD bHLH_AtbHLH_like 360 409 IPR045239 -
Mibi03g1500 480 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 354 403 IPR011598 GO:0046983
Mibi03g1500 480 MobiDBLite consensus disorder prediction 240 280 - -
Mibi03g1500 480 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 173 409 - -
Mibi03g1500 480 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 364 412 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1500 Mibi-ChrMibi03 39632567 39636540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1500 291 409 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 50.000 4.36e-30 119