Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1488 ATGGAAGATATTAGGACGTACAGCAGTGTGGGACAGGATCTCTATGTACGTGTGGATGCACTTGAATTAGCGAAGTACCAAAAAAAGCCCTTTGGTTCGCTTGGAATGAAAGGGATGGTATCACTCTCAGTCGTTTCTATATTACTAGTAATATTTCTTGTGATCTCTTTCATATATTGTTTAATGAAGAACAAGAAACGAGCAAGAGGAAGGCATAGCAAAAATTTGTTTGACTACAAATTTGAGAACTCTCCTAGTATGGATGACTTTGACAGTGGGAAAAATTCAGATTTACCATTATTTGATCTTATTGACATAGCTGCAGCAACTGGGAACTTCTCCGATGCTAACAAGCTTGGACAAGGAGGTTTTGGTTCGGTTTATAAGGGTTTGCTTAGTAATGGAATGGCAATAGCGGTGAAAAGGCTATCAAAGTACTCTGGACAGGGAATTGAAGAGTTCAGAAATGAGGTTGTTTTAATTGCAAAGCTGCAACATAGAAATCTTGTGAGAATCTTGGGTTGTTGCATAAAAGAAGAAGAGAAGATGTTGATCTATGAGTATTTGCCAAATAAAAGTTTGGACTTTTTCATATTTGATCAAGAAAGGAAATTAGTATTGAATTGGAGCAAACGGTTTGATATCATATGTGGGGTTGCACGGGGAATCTTATACCTTCATCAAGATTCAAGATTAAGAATCATTCATAGAGACTTGAAGGCTAGTAATATCTTGTTAGACTCTACATTACATCCAAAAATTGCTGATTTTGGCATGGCTAGAATATTTGGTGTTGATCAAATTGAAGCAAACACAAAACGTGTCGTTGGAACCTATGGTTACATGTCACCAGAATATGCAATGGGAGGACTATTTTCAGTAAAGTCTGATGTATATAGTTTTGGAGTTTTGCTTTTAGAGATTGTTACTGGCAAGAAGAATAGCAGTCAATACGAAGAAATTACCTCAACTTTGGTTGGACATATTTGGGACCTATGGAGAGAAGGGAGAGCAATGGAGATTGTTGATCCATCATTACTAGAAGAAGACGAGGCATGCCTTAATGAGCTTCTGAAATGCATTCAAATTGGGCTTCTATGTGTACAAGACTTTGCAGATGACAGACCAACTATGTCTACAGTTGTTTCCATGTTGGGAAGTGACACATCATCAAATCTTCCTTCTCCAAAACAGCCAGCATTTATTTTCAAAAGGAATAAAACGGGTGACAGTTCAAATCCATCTACAAGTGAAGGATTTAATTCAGTAAATGAGATGAGTACTACCGTAGTCGAAGCTCGCTAA 1305 0.3739 MEDIRTYSSVGQDLYVRVDALELAKYQKKPFGSLGMKGMVSLSVVSILLVIFLVISFIYCLMKNKKRARGRHSKNLFDYKFENSPSMDDFDSGKNSDLPLFDLIDIAAATGNFSDANKLGQGGFGSVYKGLLSNGMAIAVKRLSKYSGQGIEEFRNEVVLIAKLQHRNLVRILGCCIKEEEKMLIYEYLPNKSLDFFIFDQERKLVLNWSKRFDIICGVARGILYLHQDSRLRIIHRDLKASNILLDSTLHPKIADFGMARIFGVDQIEANTKRVVGTYGYMSPEYAMGGLFSVKSDVYSFGVLLLEIVTGKKNSSQYEEITSTLVGHIWDLWREGRAMEIVDPSLLEEDEACLNELLKCIQIGLLCVQDFADDRPTMSTVVSMLGSDTSSNLPSPKQPAFIFKRNKTGDSSNPSTSEGFNSVNEMSTTVVEAR 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1488 434 SMART serkin_6 113 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1488 434 Pfam Protein tyrosine and serine/threonine kinase 117 385 IPR001245 GO:0004672|GO:0006468
Mibi03g1488 434 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Mibi03g1488 434 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 189 393 - -
Mibi03g1488 434 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 40 430 - -
Mibi03g1488 434 MobiDBLite consensus disorder prediction 405 434 - -
Mibi03g1488 434 ProSitePatterns Protein kinases ATP-binding region signature. 119 141 IPR017441 GO:0005524
Mibi03g1488 434 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 79 188 - -
Mibi03g1488 434 CDD STKc_IRAK 119 385 - -
Mibi03g1488 434 SUPERFAMILY Protein kinase-like (PK-like) 97 385 IPR011009 -
Mibi03g1488 434 Pfam Domain of unknown function (DUF3403) 389 434 IPR021820 GO:0004674
Mibi03g1488 434 ProSiteProfiles Protein kinase domain profile. 113 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1488 434 Gene3D Phosphorylase Kinase; domain 1 80 188 - -
Mibi03g1488 434 Gene3D Transferase(Phosphotransferase) domain 1 189 398 - -
Mibi03g1488 434 MobiDBLite consensus disorder prediction 386 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1488 Mibi-ChrMibi03 38632221 38636147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1488 81 407 Receptor kinase-like Gene Family AT3G45860 57.879 2.23e-133 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g1488 PK_Tyr_Ser-Thr 2.3e-48 CL0016