Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1485 ATGCAAAAAGTTTCAGCTGCAGAACTTGGTTCAAATGTTGATGTCCCAAAAAGAAAGAAACATATAATAATTATTGTGGCTGTATTAGTAAGTTCAGCATTTGTTATCTTGGTAATGTGGCTCATAATTAAGAGATGGAGAAGAAGGGAAGGAGCTATAGAGACAGATATTCAACTGATACTGAACAAATCTAGAAGTGAACACGCATCATTCAAGATTGACATTATTAAAGCTGCAACAAAGAACTTCTCTGCCTGCAATAAGATTGGAGAAGGTGGATTTGGTCCAGTATACAAAGGTAAACTTGCATCAGGACAAGAAATAGCCGTGAAAAGACTTTCTGAATGGTCAGGACAAGGCTTACAAGAGTTCAAGAATGAAGTTATTATGATATCTCTACTTCAGCATCGAAATCTCGTCAAACTTCTAGGTTGCTGCATTCATAAAAATGAAAGAATGTTGGTCTACGAGTACATGCCAAACCGGAGCTTAGACTCTTTATTATTTGATGAAACAAGGCGTTCAACACTAACTTGGCAAAAGAGACTGGATATTATTGTTGGAGTTGCTAGAGGAATTCTTTATCTTCATAGAGATTCAAGACAAAGAATAATTCATAGGGATTTAAAAGCAAGCAATGTTCTTCTAGATAGTGAAATGAATCCCAAAATTTCTGACTTTGGAATGGCAAGAATGTTTGGTGGAGATCAAACAGAAGCAAAGACAAATAGAGTAGTTGGAACCTATGGATACATGCCACCTGAATATGCGGTAGATGGACACTTCTCATTCAAAACTGATGTCTTCAGCTTTGGCGTTTTGTTATTAGAACTGTTGAGCGGCAAGAAAAACAAAGGATTTTTCCATCCAGATCACAAGCTGAATCTCCTTGGCCATGCATGGAAGCTTTGGATTGAAGAAAAGGCAATAGACCTTATGGATTCATTACTTGAGAATCAGTTTCCTGTATCAGAAGCTCTAAGGTGTATCCAAGTGGGACTTTCTTGTGTTCAACAGAACCCAGAGGACCGACCAACAATGTCACAAGTACTTTTGATGTTAGACAATGACAATGTCTCGCTGCCACAACCGGGACGACCAGGAATGTATTCAGAGAGATGTTTCTCAGAGACGGACTCATCATCACTTGCAGGAATAAATTCTTGTTCCAATAACACAAGTATCACCATACTAGAAGGCCGTTAG 1206 0.3831 MQKVSAAELGSNVDVPKRKKHIIIIVAVLVSSAFVILVMWLIIKRWRRREGAIETDIQLILNKSRSEHASFKIDIIKAATKNFSACNKIGEGGFGPVYKGKLASGQEIAVKRLSEWSGQGLQEFKNEVIMISLLQHRNLVKLLGCCIHKNERMLVYEYMPNRSLDSLLFDETRRSTLTWQKRLDIIVGVARGILYLHRDSRQRIIHRDLKASNVLLDSEMNPKISDFGMARMFGGDQTEAKTNRVVGTYGYMPPEYAVDGHFSFKTDVFSFGVLLLELLSGKKNKGFFHPDHKLNLLGHAWKLWIEEKAIDLMDSLLENQFPVSEALRCIQVGLSCVQQNPEDRPTMSQVLLMLDNDNVSLPQPGRPGMYSERCFSETDSSSLAGINSCSNNTSITILEGR 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1485 401 Gene3D Transferase(Phosphotransferase) domain 1 159 361 - -
Mibi03g1485 401 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 14 400 - -
Mibi03g1485 401 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 159 362 - -
Mibi03g1485 401 SUPERFAMILY Protein kinase-like (PK-like) 66 369 IPR011009 -
Mibi03g1485 401 SMART serkin_6 83 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1485 401 CDD STKc_IRAK 89 356 - -
Mibi03g1485 401 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Mibi03g1485 401 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 49 158 - -
Mibi03g1485 401 ProSiteProfiles Protein kinase domain profile. 83 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1485 401 PIRSF TyrPK_CSF1-R 3 49 - -
Mibi03g1485 401 PIRSF TyrPK_CSF1-R 160 284 - -
Mibi03g1485 401 PIRSF TyrPK_CSF1-R 326 363 - -
Mibi03g1485 401 PIRSF TyrPK_CSF1-R 121 162 - -
Mibi03g1485 401 Pfam Protein tyrosine and serine/threonine kinase 86 351 IPR001245 GO:0004672|GO:0006468
Mibi03g1485 401 Gene3D Phosphorylase Kinase; domain 1 47 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1485 Mibi-ChrMibi03 38557371 38559709 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1485 4 369 Receptor kinase-like Gene Family AT4G05200 49.730 1.29e-129 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g1485 PK_Tyr_Ser-Thr 2.6e-50 CL0016