Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1484 ATGGAGCAAAAGCACGTTTTGCTTTCAGCATTGGGTGTTGGGGTTGGTCTTGGAGCAGGCCTTGGGTTGAGTTCCGGGCTTGTAGGGAATGGTGAGTCTGGTGATAAGCTTTATGATGAACAGATTGAGCAGGAGCTTTTGAGGCTGGTGATTGATGGAAAGGAATGCAAGGAAACTTTTCAAGAGTTTCCTTATTACCTGAGTGAAAAAACCCGAGAGTTATTGAAAAGTGCTGCATCTGTTCATTTAAGACAACTTTTCTTCTCCAAACACACCCGGAACCTTTCGCCAGCAAGCAAGGCTATTCTGCTTTCTGGACCTGCAGAATTTTATCTACAAGCGCTTGCCAAGGCTTTGGCAAATCACTTTGAATCAAAGTTGCTGCTGTTAGATGTAGTTGACTTCTCTTTTAAGATCAAAAGCAAATATGGATGCGAGAGAAAAGAATCATCTTCTAAAATGGCTTTATCTGAGGTGGCTTCGGAGAGAGTGTCTGGTTTGCTTGGCTCCTTTTCAGTGCTCTATTCAAACGGCAAAACCAAAGGCACTTTTCAAAAACACAGTAATGTTAATGGAAGTCCCAATGTTAATTCAAAGCTTCATGGAAATACTGCTTCCCAATCTTCTCCAGCAAATTCTGGTCCCTTGAAGCAGAAAAGCAGCTTGTGTGTAGATGAAAAACTCTTTATGCAGCTGCTTTATAAGGTCTTGGTTTCTGTGTCAGAAAAGAGTTCAATCATTTTGTACATCAGGGATGTTGACAAGATTTTCCTCCAATCAGAGAAACTATATGATTTGTTTCATGAAATGCTAGGGGAACTTCCAGGGCCAGTGCTGATACTTGGCTCCAAGATTGCTGACAAAGTCAAAAGACCTGGAGGTCTTCCACCATGGATGATTCCATCTCGCAAAGAGGATAAGCGTCCAAAAGTTGATGAAAGGCTTGCAGCATTATTCCCTTATACCATTAAGATCAAACCACCAGAAGATGAAGCTGATCTTGAAGATTGGAAAGCCCAACTGAAAGAGAACAAGAAAACAACCAAGTCTCAAGATAACAGAAACCACATCGCTGAAGTATTGGCAGAAAATGATGTTGAATGTTACGACTTGAATTCAATCAGCCATGAGGACACAAAGATACTAAGTAGTCATATTGAAGAAATTGCGGTATCTGCAATATCTTACTACTTGACGAATACCAAGGATCCAGAATATCGGAATAAAAAGCTGATAATATCAGCTGAGAGTTTGCGCCATGGTTTGGATTTATTTCGCAAAAAGAAAGGTAATGGTGATGATGGAAAGAAGAAAGAGACCAGTGGAAAGAAGGATGTTTCTCCAGACAATCAGCATGAAAGGCACATAAGATCAGAGCTTATCCCAGCAAAAGAGATAGGAGTCACATTCTCAGATATTGGTGCATTGGAGGAAGTTAAGGAAGCACTCCAAGAGCTAGTCATGCTTCCACTTCGAAGACCAGAACTCTTCAAAACCGGTCTTCTTAAGCCTTGTCGAGGTATATTGCTTTTTGGACCTCCAGGAACTGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCAGGAGCTAGTTTCATCAATGTCTCAATGTCTACCATCACATCAATGTGGTTTGGAGAAGCTGAGAAGCATGTTCGAGCTCTGTTCACACTGGCTGCAAAGGTTTCTCCAACCATTATTTTTATTGATGAGGTTGATAGCTTGCTCGGACGACGATCCAAATGTGGAGAGCATGAGGCTACCAGAAGGATTAAGAATGAATTCATGAGCCATTGGGATGGTCTATTGACAAAACAACGTGAGCGGATTCTTGTTCTTGCTGCAACCAATAGGCCATTTGACCTTGATGATGCAATCATAAGACGGTTTGAGCGAAGATTCTTGGTTGGTCTTCCATCAGCTGAGACTAGGGAGATTATCTTGAAAACTATATTAGCTAAAGAAAATACTGAAAACTTGGACTTCAAAGAGATTGCAGTCATGACAGAGGGATATACTGGAAGTGACCTCAAGAATTTGTGCACTGCTGCTGCTTATCGACCTGTTAGAGAGCTGTTAAAGCAGGAGAAACTGAAGGATACGGAAAGTAAAAAGGAAGCTGAAGGTCAAAGCTCAGAGGCTGCTTCAAGTCCCAAAACGGATTCAGAAGAGCAAGACAAGGATAAGAAAGATGTCAATGGCCAAAGCTCACAAGCTGCTTCAAGCCCTAAAGAGGATCCAAAGGGGAAAGATAAGAATAAGAAAGATGTCAAAGGCCAAAGCTCACAATCTGCTTCAAGTCCTAAAGGGGATCCCAAAGAGAAAGACAATAATAAGAAAGATGCCAAAGGCCCAAGCTCAGAAGCTGATTCAAGTGATGAGGAGGACAAAGAAGAGCCAGTAATTACCTTGAGGCCTATTAATATGGACGACATGATTCAGGCTAAGAAACAGGTTCCTGCAAGTTTTGATGCTCATGGATCAATTATGTATGAGCTGAAGCAATGGAATGAGCTGTATGGAGAACGACTTTCGCTGTAG 2544 0.4167 MEQKHVLLSALGVGVGLGAGLGLSSGLVGNGESGDKLYDEQIEQELLRLVIDGKECKETFQEFPYYLSEKTRELLKSAASVHLRQLFFSKHTRNLSPASKAILLSGPAEFYLQALAKALANHFESKLLLLDVVDFSFKIKSKYGCERKESSSKMALSEVASERVSGLLGSFSVLYSNGKTKGTFQKHSNVNGSPNVNSKLHGNTASQSSPANSGPLKQKSSLCVDEKLFMQLLYKVLVSVSEKSSIILYIRDVDKIFLQSEKLYDLFHEMLGELPGPVLILGSKIADKVKRPGGLPPWMIPSRKEDKRPKVDERLAALFPYTIKIKPPEDEADLEDWKAQLKENKKTTKSQDNRNHIAEVLAENDVECYDLNSISHEDTKILSSHIEEIAVSAISYYLTNTKDPEYRNKKLIISAESLRHGLDLFRKKKGNGDDGKKKETSGKKDVSPDNQHERHIRSELIPAKEIGVTFSDIGALEEVKEALQELVMLPLRRPELFKTGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSMWFGEAEKHVRALFTLAAKVSPTIIFIDEVDSLLGRRSKCGEHEATRRIKNEFMSHWDGLLTKQRERILVLAATNRPFDLDDAIIRRFERRFLVGLPSAETREIILKTILAKENTENLDFKEIAVMTEGYTGSDLKNLCTAAAYRPVRELLKQEKLKDTESKKEAEGQSSEAASSPKTDSEEQDKDKKDVNGQSSQAASSPKEDPKGKDKNKKDVKGQSSQSASSPKGDPKEKDNNKKDAKGPSSEADSSDEEDKEEPVITLRPINMDDMIQAKKQVPASFDAHGSIMYELKQWNELYGERLSL 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1484 847 MobiDBLite consensus disorder prediction 720 734 - -
Mibi03g1484 847 CDD AAA 474 639 - -
Mibi03g1484 847 Pfam AAA+ lid domain 660 699 IPR041569 -
Mibi03g1484 847 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 41 843 - -
Mibi03g1484 847 MobiDBLite consensus disorder prediction 698 809 - -
Mibi03g1484 847 Pfam ATPase family associated with various cellular activities (AAA) 508 638 IPR003959 GO:0005524|GO:0016887
Mibi03g1484 847 MobiDBLite consensus disorder prediction 745 759 - -
Mibi03g1484 847 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 467 642 - -
Mibi03g1484 847 MobiDBLite consensus disorder prediction 770 791 - -
Mibi03g1484 847 Gene3D - 468 640 IPR027417 -
Mibi03g1484 847 SMART AAA_5 504 641 IPR003593 -
Mibi03g1484 847 Gene3D - 641 736 - -
Mibi03g1484 847 MobiDBLite consensus disorder prediction 425 452 - -
Mibi03g1484 847 MobiDBLite consensus disorder prediction 186 217 - -
Mibi03g1484 847 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 461 687 IPR027417 -
Mibi03g1484 847 ProSitePatterns AAA-protein family signature. 611 630 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1484 Mibi-ChrMibi03 38511746 38517925 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1484 468 699 Calmodulin-binding Proteins AT3G56690 40.678 2.21e-42 165