Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1483 ATGATCTGTTACTTAACAGTGTTAATGCCAGGTCCCTTGAAGCAGAAAAGCAGCTTGTGTGTAGATGAAAAACTCTTTATGCAGCTGCTTTTTAAGGTCTTGGTTTCTGTGTCAGAAAAGAGTTCCATCATTTTGTACATCAGGGATGTTGACAAGATTTTTCTCCAGTCAGAGCAACTGTATGATTTGTTTCATGAAATGCTAGGGGAACTTCCAGGGCCAGTGCTGATACTTGGCTCCAAGATTGCTGACAAATTCAAAAAACCTGGTGGTCTCCCACCATGGATGATTCCTTCTCGCAAAGAGGATAGGTGTTCAAAAGTTGATGAAAGGCTTGCAGCATTATTCCCTTACACCATTAAGATCAAACCACCAGAAGATGAAGCCGATCTTGAACATTGGGAAGCCCAACTGAAAGAGAACAAGAAAACAATCAAGTCTCAAGATAACAGAAACCACATCGCTGAAGTACTGGCAGTAAATGATGTTGAATGTTACGACTTGAATTCAATCAGCCATAAGGACACAAAGATACTAAGTTGTCATATTGAAGAAATTGCAGTATCCGCAATATATTACTACTTGACGAATACCAAGGATCCAGAATATAGGAATAGAAAGCTGATAATATCAGCTGAGAGGCACATAAGATCGGAGCTTATCCCAGCAAAAGAGATAGGAGTAACATTCTCAGATATTGGTGCATTGGAGGAAGTTAAGGAAGCACTCCAAGAGCTAGTCATGCTTCCACTTCGAAGACCAGAACTCTTCAAAACCGGTCTTCTTAAGCCTTGTCGAGGTATATTGCTTTTTGGACCTCCAGGAACTGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCAGGAGCTAGTTTCATCAATGTCTCAATGTCTACCATCACATCAATGTGGTTTGGAGAAGATGAGAAGCATGTTCGAGCTCTGTTCACACTGGCTGCAAAGGTTTCTCCAACCATTATTTTTATTGATGAGGTTGATAGCTTGCTCGGACGACGATCCAAACGTGGAGAGCATGAGGCTACCAGAAGGATTAAGAATGAATTCATGAGCCATTGGGATGGTCTATTGACAAAACAACGTGAGCGGATTCTTGTTCTTGCTGCAACCAATAGGCCATTTGACCTTGATGATGCAATAATAAGACGGTTTGAGCGAAGATTCTTGGTCGGTCTTCCATCAGCTGAGACTAGGGAGATTATCTTGAAAACTATATTAGCTAAAGAAAATACTGAAAACTTGGACTTCAAAGAGATTGCAGTCATGACAGAGGGATATACTGGAAGTGACCTCAAGAATTTGTGCACTGCTGCTGCTTATCGACCTGTTAGAGAGCTGATAAAGCAGGAGAAACTGAAGGATATGGAAAGTAAAAAGGAAGCTGAAGGTCAAAGCTCAGAGGATGCTTCAAGTCCCAAAACGGATTCAGAAGAGCAAGACAAGGATAAGAAAGATGTCAAAGGCCAAAGCTCACAAGCTGCTTCAAGTCCTAAAGAGGATCCAAAAGGAAAAGATAAGAATAAGAAAGATGTCAAAGGCCAAAGCTCACAAGCTGCTTCAAGTCCTAAAGAGGATCCCAAAGAGAAAGAAAATAATAAGAAAGATGCCAAAGGCCCAAGCTCAGAAGCTGCTTCAAGTGATGAGGAGGACAAAGAAGAGCCAGTAATTACCTTGAGGCCTATTAATATGGACGACATGATTCAGGCTACGAAACAGGTTCCTGCAAGTTTTGATGCTCATGGAGCAATTATGTATGAGCTGAAGCAATGGAATGAGCTTTATGGAGAACGACTTTCGCTGTAG 1824 0.4139 MICYLTVLMPGPLKQKSSLCVDEKLFMQLLFKVLVSVSEKSSIILYIRDVDKIFLQSEQLYDLFHEMLGELPGPVLILGSKIADKFKKPGGLPPWMIPSRKEDRCSKVDERLAALFPYTIKIKPPEDEADLEHWEAQLKENKKTIKSQDNRNHIAEVLAVNDVECYDLNSISHKDTKILSCHIEEIAVSAIYYYLTNTKDPEYRNRKLIISAERHIRSELIPAKEIGVTFSDIGALEEVKEALQELVMLPLRRPELFKTGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSMWFGEDEKHVRALFTLAAKVSPTIIFIDEVDSLLGRRSKRGEHEATRRIKNEFMSHWDGLLTKQRERILVLAATNRPFDLDDAIIRRFERRFLVGLPSAETREIILKTILAKENTENLDFKEIAVMTEGYTGSDLKNLCTAAAYRPVRELIKQEKLKDMESKKEAEGQSSEDASSPKTDSEEQDKDKKDVKGQSSQAASSPKEDPKGKDKNKKDVKGQSSQAASSPKEDPKEKENNKKDAKGPSSEAASSDEEDKEEPVITLRPINMDDMIQATKQVPASFDAHGAIMYELKQWNELYGERLSL 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1483 607 Coils Coil 131 151 - -
Mibi03g1483 607 Pfam AAA+ lid domain 420 463 IPR041569 -
Mibi03g1483 607 Gene3D - 228 400 IPR027417 -
Mibi03g1483 607 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 221 447 IPR027417 -
Mibi03g1483 607 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 22 603 - -
Mibi03g1483 607 ProSitePatterns AAA-protein family signature. 371 390 IPR003960 GO:0005524|GO:0016887
Mibi03g1483 607 MobiDBLite consensus disorder prediction 505 519 - -
Mibi03g1483 607 Gene3D - 401 498 - -
Mibi03g1483 607 MobiDBLite consensus disorder prediction 458 566 - -
Mibi03g1483 607 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 227 402 - -
Mibi03g1483 607 Pfam ATPase family associated with various cellular activities (AAA) 268 398 IPR003959 GO:0005524|GO:0016887
Mibi03g1483 607 MobiDBLite consensus disorder prediction 529 565 - -
Mibi03g1483 607 CDD AAA 234 399 - -
Mibi03g1483 607 SMART AAA_5 264 401 IPR003593 -
Mibi03g1483 607 MobiDBLite consensus disorder prediction 458 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1483 Mibi-ChrMibi03 38496007 38503226 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1483 228 459 Calmodulin-binding Proteins AT3G56690 40.254 3.02e-43 164