Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1481 ATGAGTGCTGCATTTGTTCATCTAAAACAACTTCATCACCTTTCTAGACATATCCAGAACCTTCCACCGGCGAGCAAGGCGATTCTACTTTCCGGACCTGCAGAACAACTATATAATTTGTTCCATGAAATATTGGAGAAACTTTCAGGGCCAACTTTGATAATTGGATCCCAAGTAATTGATGTCGAAGATGAAAGTTTTGAAGATGAATTGCTAGGAAATGGGTGGTTCCCATGTTATGTTCCAGAAGCTGATGCAGAAGCTGATGAAAGGCTGGCTGCATTATTCCCTTATAATATAAAGATCAAACCTCCTAAAGATGGGAATAACCTTCAAAACTGGAAAAATAAACTAGAGGAAGACAGGAAAACAATTAAATCTCGAGATAACCAAAACCATATTGCTAAAGTTCTAGCAGAGATTGATGTTGAATGTAAAGACTTGAAATCAATCAGCCACGAGGATACAGAGATACTCAGCAAAAATATTGAAGAAATTGTGGTATCCGCAGTATCTTACTACTTAATGAATACCAAGGACCCAGAATATCATAACGGAAAGCTTGTAATATCATCTGAAAGTTTGTGCCACGGTTTGGATATATACCGCAAAAGCAATAGTGTTAAGGAAACTCAGAATCCAGACACTGATGAAAAGCAAGAAGTTCCTCCAGACAATCGACATGAAGAGAGCATAAGATCAGAGCTTATCCCTGCAAAAGAGATAGGAGTTACATTCTCAGATATTGGTGCATTAGAGGAAGTTAAAGAATCACTCCAAGAGCTAATCATGCTTCCAATTCGAAGACCAGAACTCTTCAAGACCGGTCTTCTTAAGCCTTGTCGAGGTATATTGCTTTTTGGACCTCCAGGTACTGGAAAAACAATGCTTGCAAAGGCAATTGCAAATGAAGCAGGAGCTAGTTTCATCAATGTCTCAATGTCTACCATCACATCAATGTGGTTTGGAGAAGATGAGAAGCATGTTCGAGCTCTGTTCACACTGGCTGCAAAGGTTTCTCCAACCATTATTTTTATTGATGAGGTTGATAGCTTGCTGGGGCAACGGTCAACATGTGGAGAACATGAGGCTACAAGGAGGATTAAGAATGAATTCATGAGCCATTGGGATGGTTTATTGACAAAGCAACATGAGAGAATTCTTGTTCTTGCTGCAACCAATAGGCCATTTGACCTTGATGATGCAATCATAAGACGCTTTGAGCGAAGATTCTTGGTTGGTCTTCCATCAGCTGATACTAGGGAGATTATATTGAGAACTATATTAGCTAAAGAAAATACTGAAAACTTGGACTTAAAAGAGATTGCATTCATGACAGAGGGATATACTGGAAGTGACCTCAAGAATTTGTGCACTGCTGCTGCTTATCGACCTGTTAGAGAGCTGATAAAGCAGGAGAAACTGAAGGATAAGGACAATAACGAGAAAGATGCCAAAGGCCAAAGCTCGGAAGCTGCTTCATGTGCTAAGGAGGACAAAGAAGAGCCAGTAATTACCTTAAGGCCTATAAATATGGACGACATGATTCAGGCTAAGAAACAGGTTCCTGCAAGTTTTGATGCTCATGGTTCAATTATGTATGAGCTGAAGCAATGGAATGAGCTATATGGAGAACGAATTTCCCTGTAG 1650 0.3982 MSAAFVHLKQLHHLSRHIQNLPPASKAILLSGPAEQLYNLFHEILEKLSGPTLIIGSQVIDVEDESFEDELLGNGWFPCYVPEADAEADERLAALFPYNIKIKPPKDGNNLQNWKNKLEEDRKTIKSRDNQNHIAKVLAEIDVECKDLKSISHEDTEILSKNIEEIVVSAVSYYLMNTKDPEYHNGKLVISSESLCHGLDIYRKSNSVKETQNPDTDEKQEVPPDNRHEESIRSELIPAKEIGVTFSDIGALEEVKESLQELIMLPIRRPELFKTGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSMWFGEDEKHVRALFTLAAKVSPTIIFIDEVDSLLGQRSTCGEHEATRRIKNEFMSHWDGLLTKQHERILVLAATNRPFDLDDAIIRRFERRFLVGLPSADTREIILRTILAKENTENLDLKEIAFMTEGYTGSDLKNLCTAAAYRPVRELIKQEKLKDKDNNEKDAKGQSSEAASCAKEDKEEPVITLRPINMDDMIQAKKQVPASFDAHGSIMYELKQWNELYGERISL 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1481 549 Gene3D - 244 530 IPR027417 -
Mibi03g1481 549 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 42 545 - -
Mibi03g1481 549 Coils Coil 111 131 - -
Mibi03g1481 549 Pfam AAA+ lid domain 436 479 IPR041569 -
Mibi03g1481 549 SMART AAA_5 280 417 IPR003593 -
Mibi03g1481 549 CDD AAA 250 415 - -
Mibi03g1481 549 Gene3D - 416 522 - -
Mibi03g1481 549 MobiDBLite consensus disorder prediction 206 231 - -
Mibi03g1481 549 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 243 418 - -
Mibi03g1481 549 MobiDBLite consensus disorder prediction 474 501 - -
Mibi03g1481 549 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 237 463 IPR027417 -
Mibi03g1481 549 MobiDBLite consensus disorder prediction 210 231 - -
Mibi03g1481 549 Pfam ATPase family associated with various cellular activities (AAA) 284 414 IPR003959 GO:0005524|GO:0016887
Mibi03g1481 549 ProSitePatterns AAA-protein family signature. 387 406 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1481 Mibi-ChrMibi03 38435482 38441373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1481 244 475 Calmodulin-binding Proteins AT3G56690 39.076 1.02e-41 159