Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1480 ATGAAAGCAAGCGTGGCACGTGTCAGCTTTGAGATCACTTGTTCAATATCACAACACTCGGGAGTCAGAACAACCTTTTACAGGTTGATATTCAAAGGTTCTGATATCATAACCTTAGACAAACCCATAAGTGATGAGGGTCATGATTTATATGTTCGTGTTGATGCTACTGAACTTGCGAAATATGCTACAAAATCAAAAGGAGACCTTACCAAGTTTGGGAAAGTAGGAATTGCACTGGCCTCTGTCGCTTTGGTTGCTCTTCTTACTACGTTATCTGTTTATTTCATTCGGAAGAGAAAAAGAAGAGATGAAATTCTGGAAGAGGAGGAATTTAAGTTAGATTTCCCAACACGTCAAGCACAAAATGGTGAAAATAGAGCACAACCAAGCTTACTGTTTTTCAGCATCAAAACCATAATGACTGCAACAAACAATTTCTCCATTGAGAATCAATTAGGGCAAGGTGGATTTGGTGCTGTATACAAGGGCTTATTAGATAGTGGACAAGATATGGCAGTGAAAAGGTTGTCTGAAGGTTCTGGACAAGGGATTCAAGAGTTCAAGAATGAAATCAAACTAATTGCGAAGCTGCAACATAGGAATCTTGTTAAGTTACTTGGATATTGCATTCATAAGGAAGAAAGGATGTTAATATATGAATTCCTACCCAATAAAAGCTTGGATTTCTTTCTCTTTGAAACAAATCATAGAATGTCATTAGACTGGAATACACGTTTTCATATAATATTTGGAATTGCTCGAGGTCTTCTCTATCTTCATCAAGATTCAAGGCTGAAAATAATCCATAGAGACCTTAAAGCTAGCAATGTTCTTTTAGATTCTGTAATGAATCCCAAAATTTCAGATTTTGGCATGGCTAGAATATTTGATGAGGATCAAATACAAGCAAAAACTAGAAGAATTGTGGGGACATATGGTTATATGTCTCCAGAATATGCAATGGCAGGACAATATTCGACAAAGTCCGATGTTTTCAGCTTTGGTATTCTTCTTTTGGAGATTATCAGTGGCAAGAGAAATACAAATTGTAACAAGGGAAGAGCATCCCTAAATTTGATTGGAGAGGTATGGGACTTGTGGAGAGAAGGAAAAGCCTTGGACATAATGGACTCAACAATTGGTGAATCATATCCCCTTGATGTAGCTCTAAGGTGTATACAAATTGGGCTCTTATGCGTAGAAGAAAGAGCCTTCTATAGGCCATCGATGTTAGATGTTGTTTTCATGCTTGGCAATGAAGTAAGCATACCTTCACCTCACAAGCCTGCATTCCTATTCAATTCTGAAATAGAGCATTTAGAGTCTTCAACATATGGAAATCCTTCAATAAATGTTATGACTACTTCAATCAGTGCTCGTTAA 1386 0.3723 MKASVARVSFEITCSISQHSGVRTTFYRLIFKGSDIITLDKPISDEGHDLYVRVDATELAKYATKSKGDLTKFGKVGIALASVALVALLTTLSVYFIRKRKRRDEILEEEEFKLDFPTRQAQNGENRAQPSLLFFSIKTIMTATNNFSIENQLGQGGFGAVYKGLLDSGQDMAVKRLSEGSGQGIQEFKNEIKLIAKLQHRNLVKLLGYCIHKEERMLIYEFLPNKSLDFFLFETNHRMSLDWNTRFHIIFGIARGLLYLHQDSRLKIIHRDLKASNVLLDSVMNPKISDFGMARIFDEDQIQAKTRRIVGTYGYMSPEYAMAGQYSTKSDVFSFGILLLEIISGKRNTNCNKGRASLNLIGEVWDLWREGKALDIMDSTIGESYPLDVALRCIQIGLLCVEERAFYRPSMLDVVFMLGNEVSIPSPHKPAFLFNSEIEHLESSTYGNPSINVMTTSISAR 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1480 461 SUPERFAMILY Protein kinase-like (PK-like) 130 437 IPR011009 -
Mibi03g1480 461 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 113 222 - -
Mibi03g1480 461 SMART serkin_6 147 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1480 461 Pfam Protein tyrosine and serine/threonine kinase 148 348 IPR001245 GO:0004672|GO:0006468
Mibi03g1480 461 ProSiteProfiles Protein kinase domain profile. 147 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1480 461 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 223 425 - -
Mibi03g1480 461 Gene3D Phosphorylase Kinase; domain 1 112 222 - -
Mibi03g1480 461 ProSitePatterns Protein kinases ATP-binding region signature. 153 175 IPR017441 GO:0005524
Mibi03g1480 461 CDD STKc_IRAK 153 418 - -
Mibi03g1480 461 Gene3D Transferase(Phosphotransferase) domain 1 223 425 - -
Mibi03g1480 461 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 68 451 - -
Mibi03g1480 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 268 280 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1480 Mibi-ChrMibi03 38362185 38367523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1480 113 452 Receptor kinase-like Gene Family AT4G11530 54.441 4.06e-126 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g1480 PK_Tyr_Ser-Thr 2.5e-48 CL0016