Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1448 ATGGGATTACTGCCTATTTTTCTCATGCTCTTAAGCTTCTGTGTAGGTTTCATCACTGCCTTAGATTCCATCACTTCATCTGTATTCATGAAAGATTCAGAAACCATAAGCTCAAACAACAGTGAGTTCAAACTTGGATTCTTCAGCCCCCAAAATACCACAGATCGCTATGTAGGAATCTGGTATGTCTTTGATTCCAAAGTCACATGGGTGGCTAACAGAAACCAACCATTGCAAGATTCTTCTGGGGTAATTACTATATCTGAGGACAAAAATCTTGTAATATTGAATGGGAAGAAAGAGGTGTTTTGGTCATCAAATGTGTCAAACAAAGCATCAAGTTGCACTGCCCAACTTCTAAATTCGGGTAACCTTGTGCTTATAGATCAGACAGGCAAGACATTATGGGAGAGCTTCCAACATCCAAATGACACAGACCATTCAAATTTGGCAATTGGTGCCAACCAGAAAACAGATACTTCAAGAAAAAACGCTTCTGCAAGAAAATTGGCTTACATCACCAGAACAAACAGAGTAGGAGACCAAAAGGTTCAACAAAATTGTGATACTTATAACTACTGTGGGGCATTTGCGATCTGTGACTCCAGCAATTCACCAACTTGCAGTTGTTTGAAAGGGTTTGAGCCAAGTAGTACAAATGAATGGCATAACCAAAATTGGACAAGTGGGTGTGTGAGAAGGGCATCGCTGCAGTGTGCGACTGTTGGAGGCAGAGATGATTGGTTTCTGGAGCTTCAGATGACAAAAGTTCCTGGAAACTCAACACCATCGTTTGTCTCTGAGGAAGCATGCATAACTCAGTGTATAAATAATTGCAATTGTAAAGCATATGCATATGTTTCTGCCCTTTCCTGCATGTACTGGACTGGAAACTTAACGGACATAGTAAGATGGTCCAGCGGAGGAATTGATCTTCACGTCCGCCAAGCCTATTCAGAACATGATGATAGGAAGAAAAAGAAAGACTTCAAAGTAGTTATCACAGTAACAGTGATAATAGGAGTGATTATCATTGCCATCAGTGCTTATATCTTAAAGGCGTGGGCTGCTAAATATGCTGCAAGAAAAAAGGAAAGCAAGGCAAAATTGTTGCAGAACAAAGAAGAAAACCCACTTGGAGACCTGAAATTTACAAAACTTGAGAAGCTACCCCTGTTTGATTTTAGAATCCTTGCAACTGCAACGAATGACTTCAGCATTGATAATAAGCTTGGACGGGGTGGTTTTGGTATAGTATACAAGGGACAATTGCAAGATGGACAAGAAATAGCAGTTAAAAGACTCTCAAGAACTTCTAAACAAGGGCTGGAAGAATTCATGAATGAAGTGGTTGTGATTTCAAAGCTTCAACACCGTAATCTTGTCAGACTTCTAGGATGCTGTATTGAAGGAGAGGAAAAAATTTTGGTATATGAGTACATGCCTAACAAGAGTTTGGATTCTTTTATATATGATCCTATCAAAAAGAAGGTCTTAGATTGGAAAATCCGCTTCACCATTATCAAAGGAATTGCTCGTGGTTTACTTTATCTCCATAGGGATTCTAGACTAAAAATTATACACAGAGACTTGAAGCCAAGTAATATCTTGCTAGATGCACAACTTAATCCTAAAATATCAGACTTTGGTTTGGCAAGAATATGGGAAAGCAATGAAGAAGAAGGCAATACTCGAAGGGTAGTTGGAACATACGGTTATATGTCACCTGAATACGCAATGGAAGGGCTTTTTTCAGAGAAATCAGATGCCTTTAGCTTTGGAGTCTTGCTATTTGAAATCATCAGTGGTAGGAAAAATACAAGTATTTGTGATCATGAACACTCATTGAACCTCTTAGAACTTGCATGGAAATTATGGAATGAAGAAAATATCATATCTCTCATAGATCCAGAAATATCTGACCCAGACTATGTCAATGACATTGTGAGATGCATACACATTGGATTTTTATGTGTTCAGGAATATGCAAGAGATAGGCCTTCTATGGCCACTGTAAATTCAATGCTTAACAATCACATTGTAAATCTTCCTCCGTCATGTCAGCCTGCGTACATACAGAGGAAGGCTGTGACAAGTGCAGAGTCATCTCAACAGAGTAATAAATCATTCTCTGTTAACAGTGTCACTCTCACAAACATGCAAGGAAGATAA 2172 0.389 MGLLPIFLMLLSFCVGFITALDSITSSVFMKDSETISSNNSEFKLGFFSPQNTTDRYVGIWYVFDSKVTWVANRNQPLQDSSGVITISEDKNLVILNGKKEVFWSSNVSNKASSCTAQLLNSGNLVLIDQTGKTLWESFQHPNDTDHSNLAIGANQKTDTSRKNASARKLAYITRTNRVGDQKVQQNCDTYNYCGAFAICDSSNSPTCSCLKGFEPSSTNEWHNQNWTSGCVRRASLQCATVGGRDDWFLELQMTKVPGNSTPSFVSEEACITQCINNCNCKAYAYVSALSCMYWTGNLTDIVRWSSGGIDLHVRQAYSEHDDRKKKKDFKVVITVTVIIGVIIIAISAYILKAWAAKYAARKKESKAKLLQNKEENPLGDLKFTKLEKLPLFDFRILATATNDFSIDNKLGRGGFGIVYKGQLQDGQEIAVKRLSRTSKQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGEEKILVYEYMPNKSLDSFIYDPIKKKVLDWKIRFTIIKGIARGLLYLHRDSRLKIIHRDLKPSNILLDAQLNPKISDFGLARIWESNEEEGNTRRVVGTYGYMSPEYAMEGLFSEKSDAFSFGVLLFEIISGRKNTSICDHEHSLNLLELAWKLWNEENIISLIDPEISDPDYVNDIVRCIHIGFLCVQEYARDRPSMATVNSMLNNHIVNLPPSCQPAYIQRKAVTSAESSQQSNKSFSVNSVTLTNMQGR 723
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1448 723 Pfam Protein tyrosine and serine/threonine kinase 406 672 IPR001245 GO:0004672|GO:0006468
Mibi03g1448 723 SUPERFAMILY Protein kinase-like (PK-like) 390 705 IPR011009 -
Mibi03g1448 723 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 481 684 - -
Mibi03g1448 723 ProSiteProfiles PAN/Apple domain profile. 239 317 IPR003609 -
Mibi03g1448 723 ProSiteProfiles Bulb-type lectin domain profile. 21 140 IPR001480 -
Mibi03g1448 723 Gene3D - 18 140 IPR036426 -
Mibi03g1448 723 SMART serkin_6 405 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1448 723 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 139 - -
Mibi03g1448 723 Pfam S-locus glycoprotein domain 182 217 IPR000858 GO:0048544
Mibi03g1448 723 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 101 699 - -
Mibi03g1448 723 ProSitePatterns Protein kinases ATP-binding region signature. 411 433 IPR017441 GO:0005524
Mibi03g1448 723 ProSiteProfiles Protein kinase domain profile. 405 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1448 723 PIRSF SRK 171 723 IPR024171 GO:0004674
Mibi03g1448 723 PIRSF SRK 1 180 IPR024171 GO:0004674
Mibi03g1448 723 Gene3D Transferase(Phosphotransferase) domain 1 481 684 - -
Mibi03g1448 723 ProSitePatterns Serine/Threonine protein kinases active-site signature. 526 538 IPR008271 GO:0004672|GO:0006468
Mibi03g1448 723 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 367 480 - -
Mibi03g1448 723 CDD B_lectin 27 142 IPR001480 -
Mibi03g1448 723 Gene3D Phosphorylase Kinase; domain 1 363 480 - -
Mibi03g1448 723 CDD PAN_AP_plant 237 315 - -
Mibi03g1448 723 SMART ntp_6 244 316 IPR003609 -
Mibi03g1448 723 CDD STKc_IRAK 411 678 - -
Mibi03g1448 723 SUPERFAMILY alpha-D-mannose-specific plant lectins 58 158 IPR036426 -
Mibi03g1448 723 Pfam PAN-like domain 244 302 IPR003609 -
Mibi03g1448 723 SMART blect_4 27 142 IPR001480 -
Mibi03g1448 723 Pfam D-mannose binding lectin 68 166 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1448 Mibi-ChrMibi03 36937213 36940248 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1448 393 723 Receptor kinase-like Gene Family AT4G23140 56.140 5.49e-126 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g1448 PK_Tyr_Ser-Thr 2.5e-48 CL0016