Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1445 ATGGGCTTAATGCCTATTTTTCTCATGTTCTTAAGCTTCTGTGTAGGTTTCGTCACTGCCTTGGATTCCATCACTTCGTCTGTATTCATCAAAGATTCAGAAACCATAAGCTCAAACAACGATCAGACAGGCAAGATATTATGGGAGAGTTTCCAACATCCAAATGGCACAAATTATCCAAATTTGGCAATTGGTGCCAACCAGAAAACCGGTACTTCGAGAAAAAACCCTTCTGCAAGAAAATTGGCTTATACCACCAGAACAAACATAGTAGGAGAGCAAAAGGTTCAAACCTGTGATACTTATAACTACTGTGGGGCATTTGCAATCTGTGACTCCAGTAATGATCCACCAACTTGCAGTTGTTTGAGAGGGTTTGAGCCAAGGAAAACAAATGAATGGAATAACAAAAATTGGACAAGTGGCTGTGTGAGGAGGGCATTGCTGCAGTGTGCGAGTGTTGGAGGCAGAGATGATTGGTTTCTGGAGCTTCAGATGACAAAAGTTCCTGGAAACTCAACAACATCGTTTGTTTCTGAGGAAGCTTGCAGAACTCAGTGCATAAATAATTGCAATTCCTATTCAGAACATGATAGGAAGAAGAAAGACTTCAAAGTAGTTATCACAGTAACAGTAACAGTGGGAGTGATTATCATTGCCATCAGTGTTTATATCTTAAAGGCGTGGGCTGCTAAATATTCTGCAAGAAAAAAGGAAAGCAAGGCAAAGTTATTGCACAACAAAGAAGAAAACCCACTTGGAGACCTGAAAATTGCAAAACATGAGAAGCTACCCCTGTTTGATTTTAGAATCCTAGCAACTGCAACAAATGACTTCAGCATTGATAATAAGCTTGGACGGGGTGGTTTTGGTCTAGTATACAAGGGACAATTGCAAGACGGACAAGAAATAGCAGTTAAAAGACTCTCAAGAACTTCTAAACAAGGGCTAGAAGAATTCATGAATGAAGTGGTTGTGATTTCAAAGCTTCAACACCGTAATCTTGTCAGACTTCTAGGATGCTGTATTGAAGGAGAGGAAAAAATGTTGGTATATGAGTACATGCCTAACAAGAGTTTGGATGCTTTTATATATGATCCTATTAAAAAGAAGGTCTTAGATTGGAAAATCCGCTTGACCATAATCAAAGGAATTTCTCGTGGTTTACTTTATCTCCATAGGGATTCTAGACTAAAAATTATACACCGAGACCTGAAGCCAAGTAATATCTTACTAGATGCACAACTAAATCCTAAAATATCTGACTTTGGTTTGGCAAGAATATGGGAAAGCAATGAAGATGAAGGAAATACTCGAAGAGTAGTTGGAACATACGGTTATATGTCACCTGAATACGCAATGGAAGGGCTATTTTCAGAGAAATCAGATGTCTTTAGCTTTGGAGTCTTGCTATTTGAAATCATCAGTGGCAGGAAAAATACAAGCATTTGTGATCATGATTACTCATTGAACCTCTTAGAACTTGCATGGAAATTATGGAATGAAGAAAATATCAAATCTCTCATAGATACAGAAATATCTGATCCAGACTATGTCAATGACATTGTGAGATGCATACAAATCGCATTTTTATGTGTTCAAGAATATGCAAGAGATAGGCCTTCTATGGCCACTGTAAATTCAATGCTAAACAATCACATTGTAAATCTTCCTCCGTCATGTCAGCCTGCGTACATACAGAGGAAGGCTGTGACAAGTGCAGTGTCATCTCAACAGAGTAATAAACCATTCTCTGTTAACAGTGTCACTCTCACAAACATGCAAGGAAGATAA 1794 0.3841 MGLMPIFLMFLSFCVGFVTALDSITSSVFIKDSETISSNNDQTGKILWESFQHPNGTNYPNLAIGANQKTGTSRKNPSARKLAYTTRTNIVGEQKVQTCDTYNYCGAFAICDSSNDPPTCSCLRGFEPRKTNEWNNKNWTSGCVRRALLQCASVGGRDDWFLELQMTKVPGNSTTSFVSEEACRTQCINNCNSYSEHDRKKKDFKVVITVTVTVGVIIIAISVYILKAWAAKYSARKKESKAKLLHNKEENPLGDLKIAKHEKLPLFDFRILATATNDFSIDNKLGRGGFGLVYKGQLQDGQEIAVKRLSRTSKQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGEEKMLVYEYMPNKSLDAFIYDPIKKKVLDWKIRLTIIKGISRGLLYLHRDSRLKIIHRDLKPSNILLDAQLNPKISDFGLARIWESNEDEGNTRRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVLLFEIISGRKNTSICDHDYSLNLLELAWKLWNEENIKSLIDTEISDPDYVNDIVRCIQIAFLCVQEYARDRPSMATVNSMLNNHIVNLPPSCQPAYIQRKAVTSAVSSQQSNKPFSVNSVTLTNMQGR 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1445 597 ProSiteProfiles Protein kinase domain profile. 279 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1445 597 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 38 573 - -
Mibi03g1445 597 Gene3D Transferase(Phosphotransferase) domain 1 355 558 - -
Mibi03g1445 597 ProSitePatterns Protein kinases ATP-binding region signature. 285 307 IPR017441 GO:0005524
Mibi03g1445 597 SMART serkin_6 279 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1445 597 Gene3D Phosphorylase Kinase; domain 1 255 354 - -
Mibi03g1445 597 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 242 354 - -
Mibi03g1445 597 Pfam S-locus glycoprotein domain 89 129 IPR000858 GO:0048544
Mibi03g1445 597 SUPERFAMILY Protein kinase-like (PK-like) 264 581 IPR011009 -
Mibi03g1445 597 Pfam Protein tyrosine and serine/threonine kinase 280 549 IPR001245 GO:0004672|GO:0006468
Mibi03g1445 597 CDD STKc_IRAK 285 552 - -
Mibi03g1445 597 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 355 558 - -
Mibi03g1445 597 Pfam PAN-like domain 156 198 IPR003609 -
Mibi03g1445 597 ProSitePatterns Serine/Threonine protein kinases active-site signature. 400 412 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1445 Mibi-ChrMibi03 36659749 36662797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1445 241 597 Receptor kinase-like Gene Family AT4G23140 52.717 2.18e-124 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g1445 PK_Tyr_Ser-Thr 5.9e-50 CL0016