Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1436 ATGTTCTTCATTAGATTCAGTAAAAATTCTTGCTTGTTACTTGCTACGCTTATATGTTTGTTCTCCTCTTCTCTTGTGGTCTGTGGCTTGTACTCCATTACACCATCTGTGTTAATCAAAGAACCTGAAACAGTAAGCTCAAGAAATAACACGTTCACGCTGGGATTCTTCAGCCCTGTAAATTCCACTAATCGCTACTTAGGAATTTGGTACATGTCTGAATCCTATATTGTTTGGGTTGCCAACAGAAATAACCCACTAACAGATTCTTCTGGGATTCTCACAATATCAGGAAATGGAAATCTTGTCATTTTGAATGGACAAAAACAGGTTGTTTGGTCAACAAATGTTTCACATGTTGCATCAAATTCCAGTGCTCAACTCTTGGATTCAGGCAACCTTGTCCTTGCAGATGGAATTACAGGAGCATATGTGTGGCAGAGCTTCCTGAATCCTAGTAATACATTCTTACAAGGCATGGAACTCATTACTAACAAAGAAACGGGCGATAAAGTGCAACTTACATCATGGAAAAGTGAGTATGATCCATCCAACGGAAGATTTTCTTTTGGTCTTGAAGTCCGTAATGTAACTGAAATGTTCCTGTGGGAAGGAAATAGTCCTTACTGGCGTAGTGGTCCATGGAATGGCATGAACTTCATTGGGATTACTAAGCAAAGTTCATCTAACTCCCAACACGGGTCGCTGTTGAAAGAAGATGAAGGGAGGTTTAGATTTTCTTTTTATACTGGAAATTCTATATGGATTTATACTTTGGTTTCTCAAGGTAATGTAGAGCGAAGAATTTGGAATTCCCAGACACATACATGGCAGCTTTCAAGGAAGGTAATTTCTTCAGAGTGTGATGTTTTTGGAAAATGTGGCTCATTTGGGATTTGCAATTCCCAGAGCTCCCCAATCTGCAGCTGCTTGCGAGGGTTTGAACCAAAGAACAAACAAGAATGGGAAAGGAAGAATTGGACAGGTGGGTGTGTAAGAAGAGAATCACTTCAGTGTGAAAGAGATAAAAATGATTTTCAAACTAGCAAAATAGATGGATTTTTTATGCTGCAGAATGTAAAAGTACCAGATGATGCACAGGTGTTAGCTTCCTATGCTAAGAATGCTGCAGATTGTCAAATTTCATGCCTTAAGAATTGCTCTTGTATTGCTTATGCCCATGAAGTAAACCTTGGCTGTATGGTGTGGAGTGCAGATTTACTTGACATACAGAGCTTCTCATATGGGGGGCTTGACATTTACATACGTTTAGCCAACTCAGAATTTGGCATAGCCAGGAGGAAAATGACAACACCAGTTATATTATCGGTTTTGATAGGAACATTTCTCATTGCTGTGTCTGGATATTTCTTGTGGAAAAAATGTGCAAAGCAAAAAGGGGAAAGGCAGTCTCATGACAAAAAGATCATGACTTTGAAACAAGTCCATATTCCAGAGCTATTATTGCTTGATTTTAGAAAGCTGGCAACTGCTACAAACAACTTTGACATAGCAAATAAACTTGGGGAGGGTGGCTTTGGTCCAGTTTACAAGGGAAAATTAGAAGATGGACAGGAAGTAGCAGTGAAAAAACTTTCTATATCATCTGGGCAGGGCATGGAAGAATTTATAAATGAAGTGGAACTGATTTCTAAGCTTCAACACCGAAACCTTGTTAGACTTCTTGGTTGTTGCATTGAAGGAGAAGAGATATTGGTTTATGAATACATGCCAAACAAAAGTTTGGATGCCTACATATTTGACCCACTTCAACGAAAATCCTTTGATTGGGGGAAGCGAATACTTGGGGTCATGTTCCCTCCTTTGAATGCTCAGTTGTAA 1842 0.392 MFFIRFSKNSCLLLATLICLFSSSLVVCGLYSITPSVLIKEPETVSSRNNTFTLGFFSPVNSTNRYLGIWYMSESYIVWVANRNNPLTDSSGILTISGNGNLVILNGQKQVVWSTNVSHVASNSSAQLLDSGNLVLADGITGAYVWQSFLNPSNTFLQGMELITNKETGDKVQLTSWKSEYDPSNGRFSFGLEVRNVTEMFLWEGNSPYWRSGPWNGMNFIGITKQSSSNSQHGSLLKEDEGRFRFSFYTGNSIWIYTLVSQGNVERRIWNSQTHTWQLSRKVISSECDVFGKCGSFGICNSQSSPICSCLRGFEPKNKQEWERKNWTGGCVRRESLQCERDKNDFQTSKIDGFFMLQNVKVPDDAQVLASYAKNAADCQISCLKNCSCIAYAHEVNLGCMVWSADLLDIQSFSYGGLDIYIRLANSEFGIARRKMTTPVILSVLIGTFLIAVSGYFLWKKCAKQKGERQSHDKKIMTLKQVHIPELLLLDFRKLATATNNFDIANKLGEGGFGPVYKGKLEDGQEVAVKKLSISSGQGMEEFINEVELISKLQHRNLVRLLGCCIEGEEILVYEYMPNKSLDAYIFDPLQRKSFDWGKRILGVMFPPLNAQL 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1436 613 Pfam D-mannose binding lectin 77 178 IPR001480 -
Mibi03g1436 613 Pfam PAN-like domain 349 410 IPR003609 -
Mibi03g1436 613 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Mibi03g1436 613 ProSiteProfiles PAN/Apple domain profile. 339 425 IPR003609 -
Mibi03g1436 613 CDD B_lectin 36 152 IPR001480 -
Mibi03g1436 613 Gene3D - 31 149 IPR036426 -
Mibi03g1436 613 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 217 IPR036426 -
Mibi03g1436 613 CDD PAN_AP_plant 337 425 - -
Mibi03g1436 613 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 464 576 - -
Mibi03g1436 613 SMART blect_4 36 152 IPR001480 -
Mibi03g1436 613 SMART ntp_6 349 424 IPR003609 -
Mibi03g1436 613 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 20 600 - -
Mibi03g1436 613 ProSiteProfiles Protein kinase domain profile. 502 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1436 613 ProSiteProfiles Bulb-type lectin domain profile. 30 149 IPR001480 -
Mibi03g1436 613 SUPERFAMILY Protein kinase-like (PK-like) 491 600 IPR011009 -
Mibi03g1436 613 CDD EGF_CA 287 318 - -
Mibi03g1436 613 SMART tyrkin_6 502 613 IPR020635 GO:0004713|GO:0006468
Mibi03g1436 613 Pfam Protein tyrosine and serine/threonine kinase 504 587 IPR001245 GO:0004672|GO:0006468
Mibi03g1436 613 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 149 - -
Mibi03g1436 613 Gene3D Phosphorylase Kinase; domain 1 461 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1436 Mibi-ChrMibi03 36164154 36167875 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1436 436 600 Receptor kinase-like Gene Family AT4G23190 47.305 6.82e-41 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g1436 S_locus_glycop 4.8e-26 No_clan