Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1415 ATGAGAAAATCGTGTAGGGACTGTGGCCAGAAGCGTCTTTCCACTAACGGAAAGAAGAGAACATCATCAACTGTACCTTCTTCCTTCTTCAAAGTCATGATTGCCAGCGATTTTTCTAAAGTTTTGTGTCTGCCCCCTAAATTCGGTCCTACAGTGTCAACCTTGGTTGGCAAAGAAGCCATTATTGAGGATTGTAGTGGAATGCAGTGGACAGTACAAATATCAATTGTCGACAAGTCTTATGCTTTTCAGGAGGGATGGGATGTTTTCTCGTCGGATCATAGGCTTCAAGTTGGACATTTTTTGGTGTTCAATTATAAGGGAAGATCACACTTCGTTGTTAAGGTTTTTGATAAATCTGGGTGTGAAAAGACTGACTTTCCCAATCAGAGAAAGCATAAGAAAAGAAAAACGATGACAGTTGACCTTGAAGATACCCATGATTTGTTAAAAAGACAAGAGACTGAGCAATTATTGATATCAAATGAGGAATATCCTTTGCAAGCTGGCAACTGTGAAGATACCAAAGGTATGATGGGTGGTTTCCATGAGTCCCTGGACGTTCCTGTGTGCCATGGGAAAATAGAAACAATGATTAAGAAAGAGCTTCTGGACATGACTCCAGATGTGTGCAGTTACAATGATCATCTCCAGTCAATTATTGGAGATCAAGGCAGCAAACTCAATTCAGTGAAAGCTGAACCTTCTGGCTGTGAGGGTGATATGGCTGATGAGAATAGGGCTGGACAACAAGAAGAGTGGGACAAAATGGATAAGGGTGTTATGGTTGCAGGACAGATTGAACATGTGTCAACTGGTCAGATAAGGGTCGTACATGATAAAGTGCATGCTGACAAGGTTGTTAGGCTCAGCAGCAGAATTGGAAAGCCATCATGGAAGCTGAGAGAGAATCAGTATTCTGTGACTGAGCATTTCCATTATGGATATAGACAAGCTCCCAACATGCTTGCACCCATCTCAGAGACAAACGGTAAAGATAATGTGACCAGTGGTGCTTTGGATGAGACAATGACCGATAGCTTAACGTGA 1050 0.42 MRKSCRDCGQKRLSTNGKKRTSSTVPSSFFKVMIASDFSKVLCLPPKFGPTVSTLVGKEAIIEDCSGMQWTVQISIVDKSYAFQEGWDVFSSDHRLQVGHFLVFNYKGRSHFVVKVFDKSGCEKTDFPNQRKHKKRKTMTVDLEDTHDLLKRQETEQLLISNEEYPLQAGNCEDTKGMMGGFHESLDVPVCHGKIETMIKKELLDMTPDVCSYNDHLQSIIGDQGSKLNSVKAEPSGCEGDMADENRAGQQEEWDKMDKGVMVAGQIEHVSTGQIRVVHDKVHADKVVRLSSRIGKPSWKLRENQYSVTEHFHYGYRQAPNMLAPISETNGKDNVTSGALDETMTDSLT 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1415 349 CDD B3_DNA 28 118 IPR003340 GO:0003677
Mibi03g1415 349 ProSiteProfiles B3 DNA-binding domain profile. 27 120 IPR003340 GO:0003677
Mibi03g1415 349 MobiDBLite consensus disorder prediction 1 23 - -
Mibi03g1415 349 Pfam B3 DNA binding domain 29 119 IPR003340 GO:0003677
Mibi03g1415 349 PANTHER B3 DOMAIN-CONTAINING 24 202 - -
Mibi03g1415 349 Gene3D - 21 122 IPR015300 -
Mibi03g1415 349 MobiDBLite consensus disorder prediction 329 349 - -
Mibi03g1415 349 SUPERFAMILY DNA-binding pseudobarrel domain 27 122 IPR015300 -
Mibi03g1415 349 SMART B3_2 29 120 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1415 Mibi-ChrMibi03 35575044 35578210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1415 11 128 B3 DNA Binding Superfamily AT4G01580 30.081 1.86e-13 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi03g1415 B3 1.4e-14 CL0405