Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1408 ATGATCAGAAGTCTCAATTTGATAAATCTTTTGCTTGTGCTGTCCAATTTCTCATTGGGTTGGAGCTCTGCAATGGACACCATCACCTCGGGTCTATTGATCAGAGATCATGAAACAATAAGCTCAAATAGCAGTGACTTCAAACTTGGATTCTTTAGCCCTCAAAATTCCACAAACAGGTATGTAGGGATATGGTATCTATCTGAATCTAACATCATCTGGGTGGCCAACAGGAACCAGCCACTGGTTGATGGTCTTGGGATAGTCAGAATCTCCAAGGAGGGGAATCTTGTGATTTTGGACAAACAAAATAAGAGTATTTGGTCCACAAATGTCTCACATACTGTAACAAATTCAACTGTGAAACTTTCCAACAGTGGGAATTTAGTCCTCTTTGATGACAACACAAGAGAAACTATATGGGAGAGCTTCCAACATCCTTGTGATATCTTTGTGCCAAAGATGAAGTTCAGTATCAACAAAATAAATGGGAAGAAGGTGAAACCTACATCATGGAAAAGCCAATCTGATCCATCTATGGGATATTATTCTGCTTCTCTCGAGCGGCCAAATGCTCCTGAAGTCTTTTTCTGGTTTAATGAAATTCGTCCATATTATCGAACTGGTCCATGGAACGGGAGGATTTTTATTGGGGTACCCAATTCGTCAAATAATTACCTATATGGATGGACTCTTCAAAATGAAGTTGACGGCACTGTTTATTTAACCTATGATTTTGCAAATGATAATTACTTTGCAGTTCTTGGCTTGAATCCAGAAGGTCAACTGTGGATGGCATTGTGGAGTAACAAAAGGGAGGTTTTGAGGGAGGTGTTTAACAGAGCCTACTGTGATAACTATGGCATATGTGGGGCATTTGGAAGCTGCAGTTCACAAGGTTCACCAGTTTGTAACTGTTTGAATGGGTATAAACCTAAGAAACCAGAGGAATGGAATAGGCAAAAATGGACTAGTGGGTGTGTGAGGAAGAAGCTACTGCAATGTGAAGGGTTTGCAAATAGAAGTGAAGCACATGAAAAGGATATGTTTGTGAAACTTGAGAACATGAAAGTGCCAGACTTTTTGGAGAGGTCAGCAACAACTCTATCGGAAGAAAATTGCAGAACACAGTGCTTGAATAATTGCTCTTGTGTGGCATATGCATTTGATTTGAATGGCATTGGATGCATGCAATGGAGTGGGGACTTGATTGACATACAAAGATTCTCAAGCGGAGGGCTTGATCTATATATTCGTGTGCCTTCAATTGGACATGAAACACTTTCGCACAAAAAAATCATTGCAATTACAGTGACCACAGGTCTTCTTGCTTTAACTGCATGTGCATATCTCCTACGGAAATTGATCGCTCAAAAAGCAGGTGGGATGGATTTGCGTAATCAATCTCAAGAATTGATTAGTCAACATGATGGAATCAAAATGGACGACGAGGTTCCTCATTTTGATTTTGAAGAACTTGCAACTGTGACAAACAATTTCCACTCAACAACCATGCTTGGACATGGTGGTTTTGGTTCAGTGTACAAGGTTAGTAATGTCTTGCTTGATGGAGAACTAAATCCAAAAATATCAGACTTCGGAATGGCTAGAATATTTAGAAGCGAAGAAGATCAAGCTCGTACTAGAAGAGTGGTTGGGACACTTGGCTATATATCTCCTGAATATGTAATGCAAGGGCAATATTCTGAAAAATCAGATGTTTTTAGTTTTGGAGTTCTATTGCTAGAGATTGTTAGTGGAAGGAGCAACTCTAGATTGTATAACATGGAAGGATGTCACACTCTGCTAGGATATGTATGGAAGCTATGGAATGAAGGATCACTTGTGTCCTTTATAGATTCAGATATACGCTATCAAGGTTCTTGTGATGATATGGTGCGATGTCTACAAATAGGACTTCTTTGCGTGCAAGAACTAGCAAAAGAGCGACCAGCTATGGACAACGTAGTGTCTATGCTTAACAGTGAGATTCTAAATCTTCCTTTTCCAAACAAACCTTCTTATGTACTAAATGACACGGGATTTACTTCAGAGTCCACCTCAAATATACAGACTGTGCACTCTACTAACTATGCCAGCATCACCGATGTTAGTGGGAGATAA 2124 0.3974 MIRSLNLINLLLVLSNFSLGWSSAMDTITSGLLIRDHETISSNSSDFKLGFFSPQNSTNRYVGIWYLSESNIIWVANRNQPLVDGLGIVRISKEGNLVILDKQNKSIWSTNVSHTVTNSTVKLSNSGNLVLFDDNTRETIWESFQHPCDIFVPKMKFSINKINGKKVKPTSWKSQSDPSMGYYSASLERPNAPEVFFWFNEIRPYYRTGPWNGRIFIGVPNSSNNYLYGWTLQNEVDGTVYLTYDFANDNYFAVLGLNPEGQLWMALWSNKREVLREVFNRAYCDNYGICGAFGSCSSQGSPVCNCLNGYKPKKPEEWNRQKWTSGCVRKKLLQCEGFANRSEAHEKDMFVKLENMKVPDFLERSATTLSEENCRTQCLNNCSCVAYAFDLNGIGCMQWSGDLIDIQRFSSGGLDLYIRVPSIGHETLSHKKIIAITVTTGLLALTACAYLLRKLIAQKAGGMDLRNQSQELISQHDGIKMDDEVPHFDFEELATVTNNFHSTTMLGHGGFGSVYKVSNVLLDGELNPKISDFGMARIFRSEEDQARTRRVVGTLGYISPEYVMQGQYSEKSDVFSFGVLLLEIVSGRSNSRLYNMEGCHTLLGYVWKLWNEGSLVSFIDSDIRYQGSCDDMVRCLQIGLLCVQELAKERPAMDNVVSMLNSEILNLPFPNKPSYVLNDTGFTSESTSNIQTVHSTNYASITDVSGR 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1408 707 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 651 - -
Mibi03g1408 707 Gene3D Transferase(Phosphotransferase) domain 1 513 666 - -
Mibi03g1408 707 CDD PAN_AP_plant 333 421 - -
Mibi03g1408 707 ProSiteProfiles EGF-like domain profile. 280 316 IPR000742 -
Mibi03g1408 707 ProSiteProfiles Protein kinase domain profile. 249 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1408 707 Pfam Protein tyrosine and serine/threonine kinase 518 660 IPR001245 GO:0004672|GO:0006468
Mibi03g1408 707 ProSiteProfiles PAN/Apple domain profile. 335 421 IPR003609 -
Mibi03g1408 707 SUPERFAMILY Protein kinase-like (PK-like) 516 697 IPR011009 -
Mibi03g1408 707 Pfam S-locus glycoprotein domain 206 313 IPR000858 GO:0048544
Mibi03g1408 707 Pfam PAN-like domain 345 406 IPR003609 -
Mibi03g1408 707 Gene3D - 21 145 IPR036426 -
Mibi03g1408 707 Pfam D-mannose binding lectin 72 173 IPR001480 -
Mibi03g1408 707 SUPERFAMILY Hairpin loop containing domain-like 348 416 - -
Mibi03g1408 707 ProSiteProfiles Bulb-type lectin domain profile. 25 144 IPR001480 -
Mibi03g1408 707 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 213 IPR036426 -
Mibi03g1408 707 SMART blect_4 31 147 IPR001480 -
Mibi03g1408 707 SMART ntp_6 345 420 IPR003609 -
Mibi03g1408 707 PIRSF SRK 516 707 IPR024171 GO:0004674
Mibi03g1408 707 PIRSF SRK 1 517 IPR024171 GO:0004674
Mibi03g1408 707 CDD B_lectin 32 147 IPR001480 -
Mibi03g1408 707 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1408 Mibi-ChrMibi03 35254304 35257575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1408 516 677 Receptor kinase-like Gene Family AT4G05200 50.617 4.23e-51 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g1408 PK_Tyr_Ser-Thr 1.2e-16 CL0016