Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1405 ATGGACACCATCACCTCGGGTCTATTGATCAGAGATCATGAAACAATAAGCTCAAATAGCAGTGACTTCAAACTTGGATTCTTTAGCCCTCAAAATTCCACAAACAGGTATGTAGGGATATGGTATCTATCTGAATCTAACATCATCTGGGTGGCTAACAGGAACCAGCCACTGGTTGATGGTCTTGGGACAGTTAGAATCTCCAAGGAGGGGAATCTTTCCTCTTTGATGACAACACGAGAAACTATATGGGAGAGCTTCCAAAATCCTGCTGATATCTTTGTGCCAAAGATGAAGCTCAGTATCAACAAAATAAATGGGAAGAAGGTGAAACCTACATCATGGAAAAGCCAATCTGATCCATCTATGGGATATTATTCTGCTTCTCTCGAGCGGCCAGATGCTCCTGAGATGTTTCTCTGGTTTAATGGAATTCGTCCATATTTTCGAACTGGTCCATGGAACGGGAGGATTTTTACTGGGGTACCCAATGCGTCAAATAATTACCTATATGGATCGAGAGTTGAAAATGAAGTTGACGGCACAGTTTATTTAACCTATGATTTTGCAAATGATAATTACTTTGCAGTTCTTGGCTTGAATCCAGAAGGTCAACTGTGGATGGCATTGTGGAGTAACAAAAGGGAGGTTTTGAGGGAGGTGTTTAACAGAGCCTACTGTGATAACTATGGCATATGTGGGGCATTTGGAAGCTGCAGTTCACAAGGTTCACCAGTTTGTAACTGTTTGAATGGGTATAAACCTAAGAAACCAGAGGAATGGAATAGGCAAAACTGGACTAGTGGGTGTGTGAGGAAGAAGCTACTGCAATGTGAAGGGTTTGCAAATAGAAGTGAAGCACATGAAAAGGATATGTTTGTGAAACTTGAGAACATGAAAGTGCCAGACTTTTTGGAGAGGTCAGCAACAACTCTATCGGAAGAAAATTGCAGAACACAGTGCTTGAATAATTGCTCTTGTGTGGCATATGCATTTGATTTGAATGGCATTGGATGCATGCAATGGAGTGGGGACTTGATTGACATACAAAGATTCTCAAGCGGAGGGCTTGATCTATATATTCGTGTGCCTTCAATTGGACATGGTGGGATGGATTTGCGTAATCAATCTCAAGAATTGATTAGTCAACATGATGGAATCAAAATGGACGACGAGGTTCCTCATTTTGATTTTGAAGAACTTGCAACTGTGACAAACAATTTCCACTCAACAAACATGCTTGGACATGGTGGTTTTGGTTCAGTGTACAAGGGGCAATTGAAAGATGGACAACTAATTGCAATTAAAAGACTTTCAAAAGCATCTAGACAAGGGCAAGAAGAATTCATTAATGAGGTCACACTGATTTCAAAGCTTCAACACCATAATCTAGTAAGGCTTTTAGGTTGTTGCATTCAACAAGATGAAAGAATGTTAATCTATGAGTACATGCAAAACAAGAGTTTGGATACAATTCTATTTGACCCAATCAAAAAGAAAACGTTAGACTGGCAAAATCGTTTTAAAATCATTGAAGGAATCTCTAGAGGTTTGCTTTATCTCCATAGAGATTCTAGAATAAAAATCATACATAGGGATTTAAAGGTTAGTAATGTCTTGCTTGATGGAGAACTAAATCCAAAAATATCAGACTTCGGAATGGCTAGAATATTTAGAAGCGAAGAAGATCAAGCTCGTACTAGAAGAGTGGTTGGGACACTTGGCTATATATCTCCTGAATATGTAATGCAAGGGCAATATTCTGAAAAATCAGATGTTTTTAGTTTTGGAGTTCTATTGCTAGAGATTGTTAGTGGAAGGAGCAACTCTAGATTGTATAACATGGAAGGATGTCACACTCTGCTAGGATATGTATGGAAGCTATGGAATGAAGGATCACTTGTGTCCTTTATAGATTCAGATATACACTATCAAGGTTCTTGTGATGATATGGTGCGATGTCTACAAATAGGACTTCTTTGCGTGCAAGAACTAGCAAAAGAGCGACCAGCTATGGACAACGTAGTGTCTATGCTTAACAGTGAGATTCTAAATCTTCCTTTTCCAAAGAAACCTTCTTATGTACTAAATGACACGGGATTTACTTCAGAGTCCACCTCAAATATACAGACTGTGCACTCTACTAACTATGCCAGCATCACCGATGTTAGTGGGAGATAA 2181 0.392 MDTITSGLLIRDHETISSNSSDFKLGFFSPQNSTNRYVGIWYLSESNIIWVANRNQPLVDGLGTVRISKEGNLSSLMTTRETIWESFQNPADIFVPKMKLSINKINGKKVKPTSWKSQSDPSMGYYSASLERPDAPEMFLWFNGIRPYFRTGPWNGRIFTGVPNASNNYLYGSRVENEVDGTVYLTYDFANDNYFAVLGLNPEGQLWMALWSNKREVLREVFNRAYCDNYGICGAFGSCSSQGSPVCNCLNGYKPKKPEEWNRQNWTSGCVRKKLLQCEGFANRSEAHEKDMFVKLENMKVPDFLERSATTLSEENCRTQCLNNCSCVAYAFDLNGIGCMQWSGDLIDIQRFSSGGLDLYIRVPSIGHGGMDLRNQSQELISQHDGIKMDDEVPHFDFEELATVTNNFHSTNMLGHGGFGSVYKGQLKDGQLIAIKRLSKASRQGQEEFINEVTLISKLQHHNLVRLLGCCIQQDERMLIYEYMQNKSLDTILFDPIKKKTLDWQNRFKIIEGISRGLLYLHRDSRIKIIHRDLKVSNVLLDGELNPKISDFGMARIFRSEEDQARTRRVVGTLGYISPEYVMQGQYSEKSDVFSFGVLLLEIVSGRSNSRLYNMEGCHTLLGYVWKLWNEGSLVSFIDSDIHYQGSCDDMVRCLQIGLLCVQELAKERPAMDNVVSMLNSEILNLPFPKKPSYVLNDTGFTSESTSNIQTVHSTNYASITDVSGR 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1405 726 Pfam S-locus glycoprotein domain 149 256 IPR000858 GO:0048544
Mibi03g1405 726 PIRSF SRK 1 73 IPR024171 GO:0004674
Mibi03g1405 726 PIRSF SRK 371 726 IPR024171 GO:0004674
Mibi03g1405 726 PIRSF SRK 60 381 IPR024171 GO:0004674
Mibi03g1405 726 CDD PAN_AP_plant 276 364 - -
Mibi03g1405 726 SUPERFAMILY alpha-D-mannose-specific plant lectins 38 156 IPR036426 -
Mibi03g1405 726 Gene3D Transferase(Phosphotransferase) domain 1 484 685 - -
Mibi03g1405 726 CDD STKc_IRAK 414 680 - -
Mibi03g1405 726 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 484 687 - -
Mibi03g1405 726 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 372 483 - -
Mibi03g1405 726 SUPERFAMILY Protein kinase-like (PK-like) 391 716 IPR011009 -
Mibi03g1405 726 Pfam PAN-like domain 288 349 IPR003609 -
Mibi03g1405 726 ProSiteProfiles Bulb-type lectin domain profile. 1 124 IPR001480 -
Mibi03g1405 726 Gene3D - 1 130 IPR036426 -
Mibi03g1405 726 Gene3D Phosphorylase Kinase; domain 1 371 483 - -
Mibi03g1405 726 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 2 670 - -
Mibi03g1405 726 Pfam Protein tyrosine and serine/threonine kinase 411 679 IPR001245 GO:0004672|GO:0006468
Mibi03g1405 726 SMART serkin_6 408 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1405 726 SUPERFAMILY Hairpin loop containing domain-like 291 359 - -
Mibi03g1405 726 SMART ntp_6 288 363 IPR003609 -
Mibi03g1405 726 ProSitePatterns Protein kinases ATP-binding region signature. 414 436 IPR017441 GO:0005524
Mibi03g1405 726 ProSiteProfiles Protein kinase domain profile. 408 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1405 726 ProSiteProfiles PAN/Apple domain profile. 278 364 IPR003609 -
Mibi03g1405 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
Mibi03g1405 726 SMART blect_4 7 90 IPR001480 -
Mibi03g1405 726 ProSiteProfiles EGF-like domain profile. 223 259 IPR000742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1405 Mibi-ChrMibi03 35115171 35118373 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1405 384 696 Receptor kinase-like Gene Family AT4G05200 54.633 2.98e-120 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g1405 Pkinase 8e-49 CL0016