Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1386 ATGCTACTGCAACTACACAGGCCTATTCTCTGTTATCAACAAACAGATTTTATGATCATATATATGGATCGGCTAGCACAATTCTTTTTATTTTTAATAGCTCTTCTACAATCCATATCAGGAATAACTTCAACAGAGTTCACGGTGATTAACAAATGCAATTACACAGTATGGCCAGGCATTTCTGCTGGTATTGGCAATAATCCATTATCAACCACTGGTTTTGTTCTTAAAACAGGTGAGTCAAGGGTCATCTCTGCACCCTCTTCTTGGAGTGGCCGCTTTTGGGGACGAACTCAATGCACACAAGACTCCACACGAGGAAACTTCTCTTGCGCCACAGGTGACTGTGGCTCTGGGAAGCTCGAATGCCAAGGCAGGGGAGGCACACCACCTGCAACATTGATAGAATTTGCTGTAGGCCAATTCCAAGGGCTTGATTTTTATGATGTGAGCTTGCTAGATGGATTCAATGTGCCTGTAGCGGTTGTTCCTCACGGTGGCTGTGGATCCTGCAAGAGCACATATTGTCTGGCAGATATGATCAGCCTATGCCCTTCAGACTTGAGGATAACGAGCAAAGATGGAAAAGTGGTGGCTTGCAAGGGCCCTTGTGAATCATCGAAACCTTGTAGCAACAACCGTTCCGACCAGCCGTCACCTAATTCACAACTATTCAAGAGCGTTTGCCAACGTGCCTATAGCTATCCGTATGATGATCAGCTAAGCACATTCACATGCAAAGGTGCAGATTACAATATCACCTTTTGTGAATCACCCTACACAAATCTGGACGCATCTGGCTCCCCCTCATGCCCCGAAACCATCACATTATCTAACTACATCAATGATCCAGCTACAATAAGCTCCAAAGGGGGTTTGTTCACACTGGGGTTCTTCAGTCCTAATAATTCTACAAATCGCTATGTGGGAATTTGGTACAGCATGTCCAATTCCACCATTGTATGGGTAGCTAACAGAAATAGACCATTAACAGATACTTCAGGGATGGTTAGGATATCTGAAGATGGCAATCTTGTTGTATTAGATGGGCAAAACAAATCAATTTGGTCATCAAATGTGTCAAATATTTCATCTGCTACTAGCTTTCAGATTTTAGATTCTGGAAACCTTGTCCTAGTTAATAACTTGACGAAAACTGTATGGCAAAGTTTTGAGCATCCTACAGATACATTGTTGCCAAGCATGAAAATTACCAGCAACACAAAAACAGGAGAGAAGCAGAAGTTAACAGCATGGAAAAATCAGTTTGATCCATCCCTTGGCAACTTCTCTCTGAGTCTAGAACAACTAAGTTTTGCAGAATTGTTTATATGGAATGAAAGTAACCCCTACTGGCGTAGTGGTCCATGGAATGACCAAGAAATTACAACAGTCCTTAGCATGAGTTCTGAGAATGATAATGGGGCCGAAGAGATGGTTGTTAGCTTATCGAATAGGTCTGACATCAAAGAGATAGTTGTTTTGGATTCCCAAGGAAAGTTATTGCATAAACAATGGAATGATACTGAGAGGCAATGGCAAGAAACCAATCTTGTTCAAAATTCAGATTGTGACGTTTATGGTATATGTGGGGAATTCGGAATTTGCAATTCAAAGAGTGCACCAATCTGCAGTTGTTTGAGTGGGTTTGAACCAAGAAATAGGGAGGAATGGGGTAGACAAAATTGGACAGGTGGCTGTGTTAGAAAATCAACTTTGCAATGTGAGAAAGTGAAGAATGGGAGTACTAATGGAAAGCAAGATATGTTTCTCCCTCTGCAAAATGTTAAGGCACCAGACTTTGGAGAACGATCATCTAATTCAGATGATAAATGCATAATCCTATGCTTGGAGAACTGCACTTGTAAAGCATATTCTTATGATTCGGTGCTTGGCTGTATGACATGGAACGAAAATCTAATTGACATACAACAGTTCTCAAATGGAGGGATTGACCTACATATTCGTGCAGCCAATTCAGACCCTGATAAGAGACAGAGGACATTCATCATTATCATTACTGCAATGATGGTTCCCCTCATTATCAGCGTCACTTGTGCATACTTCTTATGGAAATGGAAGGCAAAACATTTAGCAGAAAAATGGAATATCAAACAGTTATTGTTAAAAAGACATAGTGCAAATGGTGACAAAACAAGTGGCGATATTATTGGAAAGTTGTCACAAGTTAAACTCCAGGAGTTACTGGTCTATGATTTTGAAAAGGTGGCAATGGCTACAAACAACTTTCAGTTGACCAATAAACTTGGGCAAGGAGGTTTTGGTCCAGTCTATAAGGGAACACTACAAGATGGTCAGGATATAGCAATTAAGAGACTATCAAGAGCATCAGGACAAGGACAAGAGGAATTTATGAACGAGATAGTTGTCATTTCCAAACTTCAACATCGTAATCTTGTAAAACTTTTAGGTTGCTGTATTGAAGGAGAAGAAAAGATGTTGATCTACGAATACATGCCAAATAAAAGTTTGGATGCATTTATTTTTGATCTACCAAAACGCAAACTTCTCGATTGGGGGAAGCGCTTTGTCATAGTTGAAGGAATAGCTAGAGGAGTACTTTACCTTCACAGGGATTCTAGACTAAAAATTATACATAGAGACTTAAAGGCAGGAAATATCTTGCTAGATGAGAACCTGATTCCAAAAATATCAGATTTTGGTATGGCTAGAATTTTCAAAGGAAGTGAAGATCATGCTAACACAAAAAGAGTTGTTGGAACCTACGGCTATATGTCTCCAGAATATGCAATGGAAGGATTATTTTCAGAGAAATCAGATGTGTTTAGCTTTGGAGTTATACTATTAGAGATTATAAGTGGAAGAAGAAGCTCAAGCTTTTATAGCAATGAGAACTCTCTAAGCCTCTTAGGATTTGCATGGAAATTATGGAACGAAGATAACATTGTACTGCTAATAGATCCTGAAATGTTGAATCAAAACCTAGAGAAGGATATAGTGAGGTGCATACACATAGGACTTCTATGTGTACAGGAACTTGCAATAGAGAGGCCAAGTATGAACACTGTAGTTTCTATGCTTAACAGTGAGATTGTCAATCTTCCTACTCCAGGGAAGCCTGCATTCATCCAATGGCAGAGTATATTGAATCAACAAACCCCAGAAGAAAGTGAAAGATTATTTTCCAAAAACGAAGTTAGTATAAGTGACATACAGGGCAGGTAG 3210 0.3975 MLLQLHRPILCYQQTDFMIIYMDRLAQFFLFLIALLQSISGITSTEFTVINKCNYTVWPGISAGIGNNPLSTTGFVLKTGESRVISAPSSWSGRFWGRTQCTQDSTRGNFSCATGDCGSGKLECQGRGGTPPATLIEFAVGQFQGLDFYDVSLLDGFNVPVAVVPHGGCGSCKSTYCLADMISLCPSDLRITSKDGKVVACKGPCESSKPCSNNRSDQPSPNSQLFKSVCQRAYSYPYDDQLSTFTCKGADYNITFCESPYTNLDASGSPSCPETITLSNYINDPATISSKGGLFTLGFFSPNNSTNRYVGIWYSMSNSTIVWVANRNRPLTDTSGMVRISEDGNLVVLDGQNKSIWSSNVSNISSATSFQILDSGNLVLVNNLTKTVWQSFEHPTDTLLPSMKITSNTKTGEKQKLTAWKNQFDPSLGNFSLSLEQLSFAELFIWNESNPYWRSGPWNDQEITTVLSMSSENDNGAEEMVVSLSNRSDIKEIVVLDSQGKLLHKQWNDTERQWQETNLVQNSDCDVYGICGEFGICNSKSAPICSCLSGFEPRNREEWGRQNWTGGCVRKSTLQCEKVKNGSTNGKQDMFLPLQNVKAPDFGERSSNSDDKCIILCLENCTCKAYSYDSVLGCMTWNENLIDIQQFSNGGIDLHIRAANSDPDKRQRTFIIIITAMMVPLIISVTCAYFLWKWKAKHLAEKWNIKQLLLKRHSANGDKTSGDIIGKLSQVKLQELLVYDFEKVAMATNNFQLTNKLGQGGFGPVYKGTLQDGQDIAIKRLSRASGQGQEEFMNEIVVISKLQHRNLVKLLGCCIEGEEKMLIYEYMPNKSLDAFIFDLPKRKLLDWGKRFVIVEGIARGVLYLHRDSRLKIIHRDLKAGNILLDENLIPKISDFGMARIFKGSEDHANTKRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVILLEIISGRRSSSFYSNENSLSLLGFAWKLWNEDNIVLLIDPEMLNQNLEKDIVRCIHIGLLCVQELAIERPSMNTVVSMLNSEIVNLPTPGKPAFIQWQSILNQQTPEESERLFSKNEVSISDIQGR 1069
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1386 1069 SMART serkin_6 751 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1386 1069 Pfam S-locus glycoprotein domain 453 554 IPR000858 GO:0048544
Mibi03g1386 1069 SUPERFAMILY alpha-D-mannose-specific plant lectins 321 426 IPR036426 -
Mibi03g1386 1069 SMART blect_4 279 395 IPR001480 -
Mibi03g1386 1069 Gene3D - 271 393 IPR036426 -
Mibi03g1386 1069 CDD TLP-PA 46 257 - -
Mibi03g1386 1069 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 227 1014 - -
Mibi03g1386 1069 Pfam PAN-like domain 586 644 IPR003609 -
Mibi03g1386 1069 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 827 1030 - -
Mibi03g1386 1069 ProSiteProfiles Thaumatin family profile. 44 257 IPR001938 -
Mibi03g1386 1069 ProSiteProfiles Protein kinase domain profile. 751 1027 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1386 1069 ProSiteProfiles Bulb-type lectin domain profile. 273 393 IPR001480 -
Mibi03g1386 1069 Gene3D Phosphorylase Kinase; domain 1 726 826 - -
Mibi03g1386 1069 Gene3D Transferase(Phosphotransferase) domain 1 827 1029 - -
Mibi03g1386 1069 Pfam Thaumatin family 51 257 IPR001938 -
Mibi03g1386 1069 FunFam receptor-like serine/threonine-protein kinase SD1-8 726 826 - -
Mibi03g1386 1069 CDD PAN_AP_plant 573 657 - -
Mibi03g1386 1069 SMART tha2 47 258 IPR001938 -
Mibi03g1386 1069 Gene3D Thaumatin 45 257 IPR037176 -
Mibi03g1386 1069 PRINTS Pathogenesis-related protein signature 46 58 IPR001938 -
Mibi03g1386 1069 PRINTS Pathogenesis-related protein signature 147 163 IPR001938 -
Mibi03g1386 1069 PRINTS Pathogenesis-related protein signature 94 105 IPR001938 -
Mibi03g1386 1069 PRINTS Pathogenesis-related protein signature 248 257 IPR001938 -
Mibi03g1386 1069 Pfam D-mannose binding lectin 320 421 IPR001480 -
Mibi03g1386 1069 SUPERFAMILY Osmotin, thaumatin-like protein 46 257 IPR037176 -
Mibi03g1386 1069 ProSitePatterns Serine/Threonine protein kinases active-site signature. 872 884 IPR008271 GO:0004672|GO:0006468
Mibi03g1386 1069 ProSitePatterns Thaumatin family signature. 108 124 IPR017949 -
Mibi03g1386 1069 FunFam THAUMATIN-LIKE PROTEIN 1 45 258 - -
Mibi03g1386 1069 SUPERFAMILY Protein kinase-like (PK-like) 735 1022 IPR011009 -
Mibi03g1386 1069 Pfam Protein tyrosine and serine/threonine kinase 752 1020 IPR001245 GO:0004672|GO:0006468
Mibi03g1386 1069 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 269 392 - -
Mibi03g1386 1069 CDD B_lectin 279 395 IPR001480 -
Mibi03g1386 1069 SMART ntp_6 586 658 IPR003609 -
Mibi03g1386 1069 CDD STKc_IRAK 757 1023 - -
Mibi03g1386 1069 ProSiteProfiles PAN/Apple domain profile. 576 659 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1386 Mibi-ChrMibi03 34626105 34630206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1386 668 1038 Receptor kinase-like Gene Family AT4G05200 51.752 2.36e-122 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g1386 PK_Tyr_Ser-Thr 1.6e-48 CL0016