Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1379 ATGACAGAATCGACTATTATATGGGTGGCTAACAGAAATCAACGGTTGAAGGATTCTGCAGGAATTGTTACTGTATCAAAGGATGGCAATCTTGTTGTGCAAAATGGACAAAAGCAAGTAATTTGGTCTTCAAGTGTATCAAATATTGCATCAAATACTACTTGCCGGCTTTACTATTCCGGAAACCATGTTTTGCTTGATAACAACAGAGGAAACATCATATGGCAAAGTTTCGAGCATCCTTCAGATACATACCTGCCAAACATGAAAGTTAGTAACAACAGAATAACAGGTAAGAAAGTGAAATTTATATCATGGAGGAGTCCACTAGATCAATCACCTGGGAACTTCTATTTAAGTATTGAACGACTAGATCTTCCTGAAGTATTTGTATTGAATGGAACTCGCCCTTACTGGCGCAGTGGTCCATGGAATGGCAGAACCTTCACTGGGATGCCCCTGATGGGTTCTAAGTATAAAGTACACATCTCTACAATGGGATTCTTGTCTGCTCATGTAAGATTGTTGTGTTTGGTAATCATACTATGTCTCTCTTTGGGTTTTGGAAGTGCCAAAGACACCATAACATCATCTCAATTCATAAAGGACCCTGAAACTGTTAGCTCCGATGGCAGTTTGTTCACACTAGGGTTCTTCAGTACTCAGAATAACACAAATAGGCATGTGGGAATTTGGTACATGTCCGAATCGGCTATTGTATGGGTGGCTAACAGAAATCAACCATTGATGGACTCTACAGGAATTGTCACAATATCTGAGGATGGCAATCTAGTTGTACAGAATGGACAAAAGCAAATCATTTGGTCTTCAAATGTATCAAATATTGCATCAAATACTACTTGCCGGCTTTTAGATTCTGGAAACCTTGTTTTGCTTGATAACAACAGAGGAAGCATCATATGGCAAAGTTTTGAGCATCCTTCAGATACATACCTGCCAAACATGAAAATTAGTAACAACAAAATAACAGGTAAGAAAGTGAAATTTATATCATGGAGAAGTCCATTAGATCCATCACCTGGGAACTTCTATATGAGTCTTGAACGACTAAATCTTTATGAATTGTTTTTATGGAATGGAACTCGACCTTACTGGCGCAGTGGTCCATGGAATGGCAGAACCTTCACAGGGATGCCTCTAATGAGTTCTAAGTATAATAATGGTGCAAATATAGTGACTGAGATGGATGGGACTGTCTATTATATTTTTAATGTACCAAATGGGTCTGACTTCAAAGGATTCAGTGTCCTGAATTCAGAAGGGAAGTCGTTGTATAAACGATGGGATGATGCAAAGAAGATATGGCGGCAAGAAAATATTGTTCAACGATCAGACTGTGATATATATGGTATTTGTGGGCCATTTGGAAGCTGCGATTCAGAGAGCTCACCAATCTGCAATTGTTTGAGAGGATTTGAACCAAAAAGTAGAGAGGAGTGGAATCAACAAAATTGGGATGGTGGCTGTGTCAGAAGAACAGCTCTACAATGTGATGAAGTAAGAAATGAGACTGTAGATGGGTTTTTCCATATGCAAAACATTAAACTACCAGATTTTGGAGATTGGTCATCAGCCACAGAAGATGCTTGCAGAAGTCAGTGCCTAAAGAATTGCTCTTGTATTGCATATTCTTATGACACTGAGATTGGTTGTATTTCTTGGAGAGGAAACCTTACAGATGTACAACAATTCTCAGAAGAAGGAAATGACCTATATATTCGTTTAGCTTACACAGAACTTGGAAATGCGAGTGATGTAAACAAAAATAAGAAGAGAGTCATGATAATCATCGCAATTGTCATTGCACTAATAGGAGCCATTGCTATTGCCACTTGCACATATTTTTTATTGAAATGGAAAGCTAGACCCTCAGAAAACACAAGCGACAGGATTTTGGGAGAACTGACAGATGTTAGACTCCAAGAGCTATTAGCATATGATTTTGGAAAGGTTGCAATAGCGACAAACAATTTTCACTTATCTAACAAACTTGGGGAAGGCGGTTTCGGCTCAGTGTATAAGGGAAAATTGCATGATGGCCAAGAAATAGCAGTTAAGAGACTTTCTAGAGCTTCTGGACAAGGAGTGGAGGAATTTAAGAATGAAGTGATAGTTATTTCAAAGCTTCAACACCGTAACCTTGTAAGACTTCTAGGCTTTTGTATCGAAGGAGAAGAAAAGATGCTGATCTATGAGTACATGCCAAATAAAAGTTTGGATACATTTATATTTGATCAACAAAAACAAAAAATCCTAAGTTGGAGAATGCGCTTGGGCATTATTGAAGGAGTAGCTCGTGGATTACTTTATCTTCACCGAGATTCTAGACTAAAAATTATACATAGAGACCTGAAGACAAGCAATATCTTGCTAGATGAGAATTTAAACCCAAAAATATCAGATTTTGGTATGGCTAGAATATTTGGAGGGAGTGTAGACCAAGCTAACACAAGAAGAGTTGTTGGAACCTATGGCTACATGTCCCCTGAATATGCAATGGAAGGATTGTTTTCAGAAAAATCAGATGTATTTAGCTTTGGAGTTTTAATGTTAGAGATTGTTGCAGGGAGACGAAGCTCTAGTTTTTATAATGATGTAAATTCTCTCAGCCTTTTAGGATTTGCATGGAAATCATGGAATGAAGACAATATTGTGCCACTGATAGATCCAAAAATATTTGGTCTACCCCTAAAGAAGGACATAGTGAGATGTATACACATAGGACTTTTGTGCGTGCAAGACCTTGCAAGAGAGAGGCCAAGTATGAGCACTATAATTTCTATGCTCAATAGTGAGATCGTGAATCTTCCCAGTCCAAGGCAGCCAGCATTCATCCAGTGGCAAAGTATATTCAGTTCAATGCCCCATGAAGAAAATCATGGATTATTCTCAAGCAACGATGTCAGTATTACAGACATGAAAGGCAGATAG 2952 0.3831 MTESTIIWVANRNQRLKDSAGIVTVSKDGNLVVQNGQKQVIWSSSVSNIASNTTCRLYYSGNHVLLDNNRGNIIWQSFEHPSDTYLPNMKVSNNRITGKKVKFISWRSPLDQSPGNFYLSIERLDLPEVFVLNGTRPYWRSGPWNGRTFTGMPLMGSKYKVHISTMGFLSAHVRLLCLVIILCLSLGFGSAKDTITSSQFIKDPETVSSDGSLFTLGFFSTQNNTNRHVGIWYMSESAIVWVANRNQPLMDSTGIVTISEDGNLVVQNGQKQIIWSSNVSNIASNTTCRLLDSGNLVLLDNNRGSIIWQSFEHPSDTYLPNMKISNNKITGKKVKFISWRSPLDPSPGNFYMSLERLNLYELFLWNGTRPYWRSGPWNGRTFTGMPLMSSKYNNGANIVTEMDGTVYYIFNVPNGSDFKGFSVLNSEGKSLYKRWDDAKKIWRQENIVQRSDCDIYGICGPFGSCDSESSPICNCLRGFEPKSREEWNQQNWDGGCVRRTALQCDEVRNETVDGFFHMQNIKLPDFGDWSSATEDACRSQCLKNCSCIAYSYDTEIGCISWRGNLTDVQQFSEEGNDLYIRLAYTELGNASDVNKNKKRVMIIIAIVIALIGAIAIATCTYFLLKWKARPSENTSDRILGELTDVRLQELLAYDFGKVAIATNNFHLSNKLGEGGFGSVYKGKLHDGQEIAVKRLSRASGQGVEEFKNEVIVISKLQHRNLVRLLGFCIEGEEKMLIYEYMPNKSLDTFIFDQQKQKILSWRMRLGIIEGVARGLLYLHRDSRLKIIHRDLKTSNILLDENLNPKISDFGMARIFGGSVDQANTRRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVLMLEIVAGRRSSSFYNDVNSLSLLGFAWKSWNEDNIVPLIDPKIFGLPLKKDIVRCIHIGLLCVQDLARERPSMSTIISMLNSEIVNLPSPRQPAFIQWQSIFSSMPHEENHGLFSSNDVSITDMKGR 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1379 983 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524
Mibi03g1379 983 Pfam D-mannose binding lectin 5 107 IPR001480 -
Mibi03g1379 983 Pfam D-mannose binding lectin 239 340 IPR001480 -
Mibi03g1379 983 Gene3D Transferase(Phosphotransferase) domain 1 741 943 - -
Mibi03g1379 983 SUPERFAMILY alpha-D-mannose-specific plant lectins 3 145 IPR036426 -
Mibi03g1379 983 Gene3D Phosphorylase Kinase; domain 1 631 740 - -
Mibi03g1379 983 SUPERFAMILY alpha-D-mannose-specific plant lectins 229 379 IPR036426 -
Mibi03g1379 983 CDD PAN_AP_plant 500 583 - -
Mibi03g1379 983 FunFam Os04g0303100 protein 1 138 - -
Mibi03g1379 983 CDD STKc_IRAK 671 937 - -
Mibi03g1379 983 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 176 927 - -
Mibi03g1379 983 Gene3D - 188 311 IPR036426 -
Mibi03g1379 983 FunFam Os04g0303100 protein 231 371 - -
Mibi03g1379 983 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 631 740 - -
Mibi03g1379 983 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 188 311 - -
Mibi03g1379 983 SMART serkin_6 665 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1379 983 CDD B_lectin 5 81 IPR001480 -
Mibi03g1379 983 Gene3D - 2 147 - -
Mibi03g1379 983 ProSiteProfiles PAN/Apple domain profile. 504 583 IPR003609 -
Mibi03g1379 983 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 741 944 - -
Mibi03g1379 983 ProSiteProfiles Bulb-type lectin domain profile. 192 311 IPR001480 -
Mibi03g1379 983 CDD B_lectin 198 314 IPR001480 -
Mibi03g1379 983 Pfam PAN-like domain 509 568 IPR003609 -
Mibi03g1379 983 SUPERFAMILY Protein kinase-like (PK-like) 651 964 IPR011009 -
Mibi03g1379 983 Pfam S-locus glycoprotein domain 372 483 IPR000858 GO:0048544
Mibi03g1379 983 SMART ntp_6 510 582 IPR003609 -
Mibi03g1379 983 ProSiteProfiles Protein kinase domain profile. 665 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1379 983 Pfam Protein tyrosine and serine/threonine kinase 666 933 IPR001245 GO:0004672|GO:0006468
Mibi03g1379 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Mibi03g1379 983 ProSiteProfiles Bulb-type lectin domain profile. 1 78 IPR001480 -
Mibi03g1379 983 SMART blect_4 198 314 IPR001480 -
Mibi03g1379 983 SMART blect_4 1 81 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1379 Mibi-ChrMibi03 34549398 34555262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1379 591 952 Receptor kinase-like Gene Family AT4G05200 52.198 3.56e-124 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g1379 PK_Tyr_Ser-Thr 1.7e-47 CL0016