Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1367 ATGATCACCTGTGATCCTCTTGATGAAATTGCCAGTGAAAATCACAATTTGCATGTCATTTCTGATGGCAATTTGAGCGCTACTTCATCACCAGACTGCACAATTTGTAATGGTTCTGGAAATTTATCTCTTTCCCCCACAGAGTTTGGTGGCTGTGGCAATTGCCTCCTTGATTTGAGTTGTGTTTTCCCCATAAGTTTGATCAAAGAAATGGAAACAAAAGCTGAAGAAATATCTTGCTGCTATGACTTTCCCACATCATTGGATAGAAGTTCAAGCTGCTCACTTTGTCATGATTCTGATAATAAGATTGGTAAATACAAACAGTGGCAACAGGCAGCTTTGAGAGATGATTCAGATGATAATTGCTTGTTTTATCCTACAGTTCTGGACATCAGTCATAATAATTTTGAGCACTTTCAGAAGCACTGGAGAAAAGGCCATCCAGTTGTAGTGCGAGATGTTCTCCAAAGTAAATCAAACCACAGCTGGGATCCGCTGGTCATGTTCTGTGCTTATCTAGAGCAGAGTATCACAAGATATCAGAATGATAAGGACTTACTTAAAACTTGTTTGGATTGGTGTGAGGTAGAAATTAACATTAAGCAGTATTTTTCTGGTTCTCTAAGATGTCAGCCCCAGAAAAATACATGGCATGAAATGCTGAAATTGAAAGGTTTGCTGTCTTCCCAACTATTCAGAGAACAGTTTCCAACTCATTTTGCCCAAGTGATTGCTGCTCTACCACTTCAAGAATACATGAATCCCATGTCTGGTATTCTGAATTTAGCAGCGAATTATCCACAAGGCAGTGCAAAACATGACATTGGGCCATTTGTCTATATGTCTTATGGCTGTGCTGATGAACAAGTTGATTCTGTAACAAAACTCTATTACGAATCATATGATGTGGTTATAATGTGTGATTCTTTGAAAGAAAACTCATTATTGCATGCTGAGGACAAGGAACAAATTGGAGTTCAGAGTTTGGTTAGAGAAGAAATGAATATCTTCCGGAGAGTCAACAGAACAACATTTATATCTGCAGACTTAGGTAAAGCAGCTAGTAAGGGTACAAACAGCAATATTTCCCAGGGTGGAGAATGTGTTTCAGATACAGATTCAGATTTTGAATCCACTGTACTTCATGGGACAGCCCAGGATACTCCATTGTCCACGCTTGATAATCCCAGATATTCCAGTGACAGCTCAAATAACGATCGGGATAAAAACCTTGCTGATCATTCTGGTGCTCAGTGGGATGTATTTCGCAGGCAAGATGTTCCAAAACTGATTGAATACCTTAAAAGACATTGCAGTGAATTTGGTGATACCCATAACTACAAAAAGAAGATGGTTCACCCAATTCTAGATCAGATCTTCTTTCTTGACGACGCCCACAAAATGAGGCTTAAGGAGGAGTTTGAAATTGAACCATGGACTTTTGAGCAACATGTTGGAGAAGCTGTCATCATTCCTGCTGGATGTCCATACCAGATCAGGAATCCAAAGTGTTGTGTTCATGTGATACTTGAATTTGTGTCACCTGAAAATGTTACCGAGTCTATTGAGTTAATTGATGGAGTCCATCTACCTCCTGAAGGACATAAAGAAAAAGTGGATAAGCTGGAGATGAAGAAAATGGCCCTTTACAGCATGAGAACAGCAATAAAAGAAATAGGAGATCTTACATGCAGTAAGTGA 1704 0.3926 MITCDPLDEIASENHNLHVISDGNLSATSSPDCTICNGSGNLSLSPTEFGGCGNCLLDLSCVFPISLIKEMETKAEEISCCYDFPTSLDRSSSCSLCHDSDNKIGKYKQWQQAALRDDSDDNCLFYPTVLDISHNNFEHFQKHWRKGHPVVVRDVLQSKSNHSWDPLVMFCAYLEQSITRYQNDKDLLKTCLDWCEVEINIKQYFSGSLRCQPQKNTWHEMLKLKGLLSSQLFREQFPTHFAQVIAALPLQEYMNPMSGILNLAANYPQGSAKHDIGPFVYMSYGCADEQVDSVTKLYYESYDVVIMCDSLKENSLLHAEDKEQIGVQSLVREEMNIFRRVNRTTFISADLGKAASKGTNSNISQGGECVSDTDSDFESTVLHGTAQDTPLSTLDNPRYSSDSSNNDRDKNLADHSGAQWDVFRRQDVPKLIEYLKRHCSEFGDTHNYKKKMVHPILDQIFFLDDAHKMRLKEEFEIEPWTFEQHVGEAVIIPAGCPYQIRNPKCCVHVILEFVSPENVTESIELIDGVHLPPEGHKEKVDKLEMKKMALYSMRTAIKEIGDLTCSK 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1367 567 SUPERFAMILY Clavaminate synthase-like 126 550 - -
Mibi03g1367 567 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 26 565 IPR045109 GO:0032454|GO:0033169
Mibi03g1367 567 SMART cupin_9 237 530 IPR003347 -
Mibi03g1367 567 MobiDBLite consensus disorder prediction 355 401 - -
Mibi03g1367 567 ProSiteProfiles JmjC domain profile. 256 530 IPR003347 -
Mibi03g1367 567 Pfam JmjC domain, hydroxylase 416 510 IPR003347 -
Mibi03g1367 567 MobiDBLite consensus disorder prediction 355 413 - -
Mibi03g1367 567 Gene3D Cupin 128 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1367 Mibi-ChrMibi03 34146494 34150306 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mibi03g1367 JmjC 3.2e-10 CL0029