Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1358 ATGGGCTTGCATGTTCGAATCCTTGTCATGTTGCTGTTAGCTTTTGCAGGAACCTTTTGTACAGGAGATACTGACTTGCTTGACGTTGCAGCAATCAATAGTTTATATGTTGCTCTGGGCTCACCGCCCCTTCAAGGTTGGAAAACCACTGGCGGAGATCCATGTGCAGAACTGTGGCAGGGGGTGGCTTGTGTCTTCTCCAACATAACTCAATTAAGTCTCCAAGGCATGAATTTGGGTGGAGAGCTGGGCAACAATTTAAATTTTCCTTCCATCATTGAAATAGATCTTAGCAACAACCACATTGGAGGGCCTATTCCATCCACACTTCCTTTTACTCTGAGAAACTTGTCTCTTTCAAGTAATCAGATTAATGGAAGTATTCCAGATGCCCTATCCTCTCTAACACAATTGTCAGATTTGTCATTAAGTAATAACTTTCTGGACGGAGAAATCCCTGATGTATTTCAGCAGCTTACTGGCCTGATAAACATAGACCTGTCAGCTAATAACTTGAGTGGCCAGCTACCCCCCTCAATGGGAAATTTGTCATTTCTTTCAACATTACACTTGCAGAATAATGAGCTTTCTGGGTTTCTTAATGTTTTGCAAGACCTTCCTCTTCAGGATTTGAATATAGAGAACAATTTATTTTTTGGGCCGATTCCTCCACAATTGTTGGGTATTCCGAATCTCAGGAAGGATGGAAATCCATTTAATAGTACTGTCATCCCCTCACCTCCTGCTGCAGCCCCAGCTCCTGTAGCTATGGCTCCATCACCCATAGGAGCTCCTTGGAATGTGGAAAATAGACCATTTACCTTGGTTGCACCAATGCCTGCAAGTTCTAGGAAGTCTTTAATATCTAAGAATGTTATTTGGATTGCTATTGCTGGGTTTTTCATATTTATTATGCTAGGAGTCTGTCTTTTTTTGTTGTGGTGCTACAAGAGAAGGCCAGAAAACAAAAATGCTAAAAAAATGGTTGTGGGTTTGGATACAATGTCATTACATAAACATCAGTACAATGATTCTTTGGTGAAAGCATCTGGGAAATCAATAGGATGTCTTGAATATGGAGAACAAAATAGAAGAACAATTATGATTCCAAATGTTCAGGATGATCAGGAAATGCATGTGAACAGAGTATCAGCAGGCTCCAAATTTGCAACATTGCAGCCACCACCATTTCTTCCAATTAATCTTGGGGGAAAGGACTTAACCAAAACAGCCATTCCTACCAAAGTTACTGAAAGACAAGTTATGGCAAGTTCCTTGCAAGTTTATACTATTGCATCACTTCGGCAGTATACAAATAGTTTTTCCCAAGAAAATTATATTGGTGAAGGCACACTAGGTGTTGTTTATCGGGCAGAACTCCCTGATGGAAAGCAACTGGCAGTGAGGAAACTGGGTGCTACTGCTTCTATAGGACATGAGCAGTTTCTTCAATTAGTGTCCAGTATTTCCAAAATTCAACATGCTAATATTGTGAAGCTTATGGGCTATTGTGCTGAGGATGGTCAACAACTTCTTGTATTTGATTATGTCAGCAATGGATCTCTTCATGATGCGCTGCATGAAGATAATGAACTCCATGCTAAACTGTCATGGAATGCACGCATTCAGGGGGCACTTGGAGCTGCAAGAGCTTTAGAATATCTTCATGATAACTTCCAGCCACCTATTGTGCATCAAAACTTCAAATCAGCTAATGTTCTCTTGAACACTGAGCTTGAAGTATGTGTTTCTGATTGTGGATTTGGTCCTTTACTATCTTCTGGATCTGCTGGTCAGTTGTCAGGACTCTTCACAGCAAATGGTTATGGTGCGCCAGAATTTGAATCACGGTGTTATACAAAGCAGAGTGATGTCTTTAATTTTGGAGTTGTTATGCTAGAACTCCTCACTGGACGAAAATCCTGTGACAGGTCACGATCTTGTGGTGAGCAATTTCTGATCAGATGGGCAGTTCCTCAACTGCATGACATTGATGCTTTAACGAAAATGGTTGACCCATCCATAATTGGAACTTATTCTATGAAGTCCTTGTCACGTTTTGCAGATATCATTTCTTCATGTATACAGCGTGAACCAGAGTTCCGGCCAGCAATGGCGGAAGTTGTTCAAGATCTCTTACGAATGATCTAG 2151 0.4096 MGLHVRILVMLLLAFAGTFCTGDTDLLDVAAINSLYVALGSPPLQGWKTTGGDPCAELWQGVACVFSNITQLSLQGMNLGGELGNNLNFPSIIEIDLSNNHIGGPIPSTLPFTLRNLSLSSNQINGSIPDALSSLTQLSDLSLSNNFLDGEIPDVFQQLTGLINIDLSANNLSGQLPPSMGNLSFLSTLHLQNNELSGFLNVLQDLPLQDLNIENNLFFGPIPPQLLGIPNLRKDGNPFNSTVIPSPPAAAPAPVAMAPSPIGAPWNVENRPFTLVAPMPASSRKSLISKNVIWIAIAGFFIFIMLGVCLFLLWCYKRRPENKNAKKMVVGLDTMSLHKHQYNDSLVKASGKSIGCLEYGEQNRRTIMIPNVQDDQEMHVNRVSAGSKFATLQPPPFLPINLGGKDLTKTAIPTKVTERQVMASSLQVYTIASLRQYTNSFSQENYIGEGTLGVVYRAELPDGKQLAVRKLGATASIGHEQFLQLVSSISKIQHANIVKLMGYCAEDGQQLLVFDYVSNGSLHDALHEDNELHAKLSWNARIQGALGAARALEYLHDNFQPPIVHQNFKSANVLLNTELEVCVSDCGFGPLLSSGSAGQLSGLFTANGYGAPEFESRCYTKQSDVFNFGVVMLELLTGRKSCDRSRSCGEQFLIRWAVPQLHDIDALTKMVDPSIIGTYSMKSLSRFADIISSCIQREPEFRPAMAEVVQDLLRMI 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1358 716 Gene3D Transferase(Phosphotransferase) domain 1 517 715 - -
Mibi03g1358 716 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 406 516 - -
Mibi03g1358 716 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 10 714 - -
Mibi03g1358 716 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 517 716 - -
Mibi03g1358 716 ProSiteProfiles Leucine-rich repeat profile. 113 136 IPR001611 GO:0005515
Mibi03g1358 716 ProSiteProfiles Protein kinase domain profile. 441 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1358 716 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 25 250 - -
Mibi03g1358 716 Gene3D Ribonuclease Inhibitor 26 246 IPR032675 -
Mibi03g1358 716 Pfam Leucine rich repeat 113 172 IPR001611 GO:0005515
Mibi03g1358 716 Pfam Protein tyrosine and serine/threonine kinase 444 712 IPR001245 GO:0004672|GO:0006468
Mibi03g1358 716 SUPERFAMILY L domain-like 28 233 - -
Mibi03g1358 716 Gene3D Phosphorylase Kinase; domain 1 404 516 - -
Mibi03g1358 716 SUPERFAMILY Protein kinase-like (PK-like) 420 712 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1358 Mibi-ChrMibi03 33972490 33980364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1358 28 716 Strubbelig Receptor Gene Family AT4G03390 51.075 0.0 661
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mibi03g1358 PK_Tyr_Ser-Thr 8.1e-35 CL0016