Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1339 ATGGTTTCTAGGTCGTATTCTAACTTGTTAGAGCTTACTTCCTGTGATTCCTTATCTTTTGGTCGGGAGAAGAAGAGGCTTCCTCGAGTGGCAACTTTTACTGGAGTACTTTCTGAAATAGATGATGAGAGCAATAGCGCTGGCTCTGATGCTCCCTCATCCATCTCTCAAGATAGGATGATTATTGTTGGCAACCAGCTTCCTTTGCAAGCTCACAGAAAAGATGATGGTAAGTGGGACTTCACCTTGGACGAGGACTCTCTTCTTTTACAGCTGAAAGATGGCCTGGGAGATGATGTAGAAGTGATTTATATTGGGTGTCTCAAAGAAGAAATTGATGTGAGTGAGCAAGATGATGTTGCTCAGTATTTGCTTGACACTTTCAAATGTGTACCCACGTTCCTACCTCCTGAGCTTTTCAGTAAATTCTATCATGGGTTCTGCAAGCAGCATCTATGGCCTTTATTTCACTACATGCTTCCACTGTCACCTGATCTTGGTGGTCGATTCGATCGGTCTCTTTGGCAAGCTTATGTTTCTGTGAATAAGATATTTGCGGATAAAGTAATGGAAGTCATTAGCCCTGATGATGACTTTGTGTGGGTTCATGATTACCATTTGATGGTTCTGCCAACATTTTTGAGGAAGAGATTTAACCGGGCGAGGCTAGGATTTTTTCTCCACAGTCCATTCCCTTCCTCTGAGATCTACCGAACACTTCCTGTAAGGGATGAACTTCTTAGAGCTCTTCTGAACTCTGACCTTATTGGATTTCATACTTTTGATTATGCAAGGCATTTTCTCTCATGTTGTAGCAGAATGCTCGGGCTTTCTTATCAATCCAAGCGGGGCTACATAGGCCTTGAGTACTATGGTAGAACTGTTAGTATCAAGATTCTTCCTGTTGGAATCCATATCGGTCAACTTCAATCTGTCATGAATCTTCCTGAGACAGAGAATAAGGTCTCAGAATTACGAGACCAGTTCAGAGGTCAGACTGTAATGCTTGGGGTTGATGACATGGACATCTTCAAAGGAATTAGCTTAAAACTTTTGGCCATGGAGCAATTGCTCTACCAACATCCAGATAAGCGAGGCCAAGTTGTTATGGTGCAAATCGCAAATCCTGCAAGGGGACGGGGGAAGGATGTACAGGAGGTACAAAGTGAAACACATGCTACCGTAAAAAGGATAAATGATACATTTGGAAGGCCTGGATACACTCCTGTTATCTTGATTGACACACCACTTAAATTCTATGAGCGAATAGCTTATTATGTGATTGCAGAATGCTGTCTTGTTACTGCGGTGAGAGACGGTATGAACCTTATACCCTATGAATATGTTATATGTCGACAAGGAAATGAGAAACTAGACCAGATTTTGGGTATAAATATAAATCCATTTCCTCAAAAGAGGAGCATGCTGGTGGTATCTGAATTCATTGGGTGCTCCCCTTCATTAAGTGGGGCAATTCGAGTGAATCCATGGAATATTGATGCTGTTGCTGAAGCTATGGATTCTGCACTTATGGTCCCGGAGTCTGAAAAACAGATGCGACATGAGAAACATTATAGGTATGTTAGTACACATGATGTTGCATATTGGGCACATAGCTTCTTGCAAGATTTGGAAAGAGCGTGTAGGGACCATCTTAGAAGGAGGTGCTGGGGCATTGGTTTTGGCCTAGGATTTCGGGTAATTGCTTTAGATCCAAATTTCAGAAAGTTATCAGTTGAGCATATTGTTTCGGCTTACAAGAGGACCAAGCACCGGGCAATCCTTTTGGATTATGATGGTACAATGATGCAGCCAGGAACAATCAGTACAACCCCAAGTGCTGATGCTGTTGAAATCTTGAAGAGCCTGTGCAATGACCCTGATAATGTTGTTTTTGTAGTTAGTGGGAAGGAGAGAGAGACTCTGACTGACTGGTTTTCTTCATGTGAAGGGCTAGGGATTGCCGCAGAACATGGTTACTTTTTGAGGACAAGTAATGCTGCAGAATGGGAAACTTGTCTTTCTGTACCAGATTTTGACTGGAAGCAGATTGCTGAGCCAGTAATGCAACTATACACAGAAACAACAGATGGTTCTAACATTGAGGCCAAAGAGAGTGCTTTAGTTTGGAATTATCAGTATGCAGATCGTGATTTTGGTTCATGCCAGGCTAAAGAGCTTCTAGACCACCTGGAAAGTGTTCTTTCTAATGAACCTGTTTCCGTTAAAAGTGGCCCACATATCGTTGAAGTTAAACCCCAGGGTGTCAACAAGGGAATTGTAGCAGAACATCTTCTCAAAACAATGCGTGAAAAGGGAGTAATTCCAGATTTTGTTCTATGTATTGGGGATGACAGATCAGATGAGGACATGTTTGAAGTAATCATGAGTGCGAGGGACTCTTTGTCGCCTGTCGCCGAGGTGTTTGCTTGCACAGTCGGGCAGAAACCAAGCAAGGCCAAGTATTATTTGGAAGACACAAGTGAGATACTGAGAATGTTGCAAGGCCTTGCCCATGCTTCAGAGCAGTTTGTTAAAAGTCCTTCCAAACCTCCATCACACTGA 2565 0.4265 MVSRSYSNLLELTSCDSLSFGREKKRLPRVATFTGVLSEIDDESNSAGSDAPSSISQDRMIIVGNQLPLQAHRKDDGKWDFTLDEDSLLLQLKDGLGDDVEVIYIGCLKEEIDVSEQDDVAQYLLDTFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRARLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQSVMNLPETENKVSELRDQFRGQTVMLGVDDMDIFKGISLKLLAMEQLLYQHPDKRGQVVMVQIANPARGRGKDVQEVQSETHATVKRINDTFGRPGYTPVILIDTPLKFYERIAYYVIAECCLVTAVRDGMNLIPYEYVICRQGNEKLDQILGININPFPQKRSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMDSALMVPESEKQMRHEKHYRYVSTHDVAYWAHSFLQDLERACRDHLRRRCWGIGFGLGFRVIALDPNFRKLSVEHIVSAYKRTKHRAILLDYDGTMMQPGTISTTPSADAVEILKSLCNDPDNVVFVVSGKERETLTDWFSSCEGLGIAAEHGYFLRTSNAAEWETCLSVPDFDWKQIAEPVMQLYTETTDGSNIEAKESALVWNYQYADRDFGSCQAKELLDHLESVLSNEPVSVKSGPHIVEVKPQGVNKGIVAEHLLKTMREKGVIPDFVLCIGDDRSDEDMFEVIMSARDSLSPVAEVFACTVGQKPSKAKYYLEDTSEILRMLQGLAHASEQFVKSPSKPPSH 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1339 854 Gene3D Glycogen Phosphorylase B; 52 310 - -
Mibi03g1339 854 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 45 839 IPR001830 GO:0003824|GO:0005992
Mibi03g1339 854 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 591 708 - -
Mibi03g1339 854 SUPERFAMILY HAD-like 592 838 IPR036412 -
Mibi03g1339 854 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 594 796 IPR006379 -
Mibi03g1339 854 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 721 850 - -
Mibi03g1339 854 TIGRFAM T6PP: trehalose-phosphatase 590 838 IPR003337 GO:0003824|GO:0005992
Mibi03g1339 854 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 549 - -
Mibi03g1339 854 Gene3D - 717 849 IPR023214 -
Mibi03g1339 854 Gene3D - 591 708 IPR023214 -
Mibi03g1339 854 Gene3D Glycogen Phosphorylase B; 311 529 - -
Mibi03g1339 854 Pfam Glycosyltransferase family 20 59 545 IPR001830 GO:0003824|GO:0005992
Mibi03g1339 854 CDD GT20_TPS 59 545 IPR001830 GO:0003824|GO:0005992
Mibi03g1339 854 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 52 310 - -
Mibi03g1339 854 Pfam Trehalose-phosphatase 595 828 IPR003337 GO:0003824|GO:0005992
Mibi03g1339 854 FunFam Alpha,alpha-trehalose-phosphate synthase 312 529 - -
Mibi03g1339 854 CDD HAD_TPP 593 829 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1339 Mibi-ChrMibi03 33101548 33104962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1339 1 838 Trehalose Biosynthesis Gene Families AT4G17770 79.454 0.0 1433