Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1327 ATGGATAGAGCTTCACAATCCCAAAGAAACCACAAAAACCCTTCCTTTTTCAAGGTTCTAATCCAAGATTTCTCTACCCGCCTGCTAATCCCACGGGCTTTTAACAAGGTGTTTGGTAAAGAGGTGCCAAAGAAAGCAATTCTCGAGACTTATTATGTAAAATCTGAAGAAGTCGAAGTGGAAAAGCATGAGAATAGATTTTGTTTCTGCAAGGGATGGGGTAGATTTGTTGAGGATAATAAATTAGAGAATGGAGATTTTTTAGTGTTCAAATATATGACAGATTGTTTAAAATTCAAGGTCAAGATCTATGGCAAATCATGCTGCGAGAAGAAATATCATTCTTCTGATTCAGAAACTGGGAAAAACGAAAAAGAAAGAAATAATAAAAACAATAATCTTGTAGATGGACAAAAGAGAAAGAGGGAAGAAGAAAAAGAAAAGGATATTAATAATAATGTGAACGAAGATGGAGCAGTGAAATCTGCAGAAGGAATTGAGACGGATTCGGATTCTGATTCTGATTTTGGATACGAAGATTCTGAAGATGAACCAATCAATATTGATTCTGATTCAACTTATCTTATCGCCGAAGAAGTTGGTAAGTCTCGTTGTGCCTCCTTAACGGTTAACGTTCTCAATAAAGAACACTTTGGAAACTCTTTTTTTTTTTTTAACTGA 681 0.3495 MDRASQSQRNHKNPSFFKVLIQDFSTRLLIPRAFNKVFGKEVPKKAILETYYVKSEEVEVEKHENRFCFCKGWGRFVEDNKLENGDFLVFKYMTDCLKFKVKIYGKSCCEKKYHSSDSETGKNEKERNNKNNNLVDGQKRKREEEKEKDINNNVNEDGAVKSAEGIETDSDSDSDFGYEDSEDEPINIDSDSTYLIAEEVGKSRCASLTVNVLNKEHFGNSFFFFN 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1327 226 MobiDBLite consensus disorder prediction 112 187 - -
Mibi03g1327 226 CDD B3_DNA 14 104 IPR003340 GO:0003677
Mibi03g1327 226 SMART B3_2 16 107 IPR003340 GO:0003677
Mibi03g1327 226 Coils Coil 127 147 - -
Mibi03g1327 226 PANTHER B3 DOMAIN-CONTAINING 7 164 - -
Mibi03g1327 226 ProSiteProfiles B3 DNA-binding domain profile. 13 107 IPR003340 GO:0003677
Mibi03g1327 226 Gene3D - 7 109 IPR015300 -
Mibi03g1327 226 SUPERFAMILY DNA-binding pseudobarrel domain 10 109 IPR015300 -
Mibi03g1327 226 MobiDBLite consensus disorder prediction 169 187 - -
Mibi03g1327 226 Pfam B3 DNA binding domain 16 106 IPR003340 GO:0003677
Mibi03g1327 226 Coils Coil 225 226 - -
Mibi03g1327 226 MobiDBLite consensus disorder prediction 112 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1327 Mibi-ChrMibi03 32693057 32693891 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1327 14 176 REM Transcription Factor Family AT3G06220 30.952 9.63e-15 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mibi03g1327 B3 2.1e-15 CL0405