Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1309 ATGGATATTACTTTCCAAGCACTAAAGCAGACTGATATTGGGAGGCACGTTAATCGGTTGCGCAAGCATCCATCCAATGATGTTCGGAGATTGGTGAAGTTACTTGTCAGGAAATGGAAGGAAATTGTAGATGAATGGTATCCTCAACCCACAGCGGAAACTACGGTAACCTCAACCCATGGCGGTGAATGTGTTGGCGATGACGACGACCGTATTGTTGTGACAACGGCAACATCTTCCAACAATGGTGGCGATTCTCCACTCCACTTTGCATATTAG 279 0.4588 MDITFQALKQTDIGRHVNRLRKHPSNDVRRLVKLLVRKWKEIVDEWYPQPTAETTVTSTHGGECVGDDDDRIVVTTATSSNNGGDSPLHFAY 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1309 92 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1 58 IPR035441 -
Mibi03g1309 92 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 1 52 IPR035441 -
Mibi03g1309 92 Pfam TFIIS helical bundle-like domain 2 43 IPR017923 -
Mibi03g1309 92 CDD TFIIS_I 1 44 - -
Mibi03g1309 92 ProSiteProfiles TFIIS N-terminal domain profile. 1 46 IPR017923 -
Mibi03g1309 92 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 63 IPR044790 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1309 Mibi-ChrMibi03 32144497 32146805 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Mibi03g1309 Med26 9.8e-12 No_clan