Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1302 ATGGCCTTTGAGCCATTAATTTGGTACTGTCAGCCAGAGAAGAACATCATATGGGCTAGTCTAGTAGACAGTGCTTTTGGGTCCTATACACCATGTGCAATGAACACTCTTGTGATCTCTGTCTCCAATTTGGTTCTTATTGGCCTTTGTTTATATCGAATATGGCTGACTATTAGCAATGCCAAAGCTCAAAGGTTTCACTTGAGCTCGAATTACTATAATTACTTTCTGGGATTGTTGGCTGGTTACTGTGCTGCTCAACCATTACTGAGATTGATATATGGCATTTCTGATTTCAACTTGAATGGAAAATCTGATTTTGCTCCTTTTGAGATAACAGGTTTGATCATTGAAGCACTTACTTGGTCCTCAATTTTAATTCTTATTGTCATGGAAACTAAGATTTATATAAAGCAATTCCGGTGGTACGTGAGGTTTGGAGTCTTTTATGTTATGGTGGCTGATCTTGTAATGCTTAATCTTCGTCTGTCAGTGATAAATTACTGCAGCAGATCTGCCCTGTATCTGTTCATCAGCACTATGTTCTGCCAGGTGCTATTTGGGATTCTCCTTGTTGCTTACATTCCCAGTTTAGTTCCTTATGCTGGCTATGTAACAGTGCAAGAAGATTTTCAAGAGAATGCTGAGTATGAGCCACTTTGCGGAGAACATCAAGTTTGCCCTGAGAGACATGTTAATGTATTGTCCAGATTATCGTATAGTTGGATGACTCCACTCATGAGACAAGGATATAGAAAACCCATCACTGAATATGATGTTTGGAAGTTAGACACATGGGATCAAACAGACACGCTTTTTGAAAAGTTTCTAAAGTGTTGGACGTTAGAATGTCAAAGGTCTAGGCCTTGGCTTTTAAGAGCACTAAATAATAGCCTTGGGAAAAGGTTTTGGTGGGGAGGCGCTTATAAGATTTGTTATGATCTTTCTCAGTTTGTGGGGCCTATTTTGCTTAATCATCTATTACAATCGATGGAACGAGGAGATCCATCATGGATTGGTTACATCTATGCTTTCTCCATATTTTTAGGAGTGTCATTTGGTGTACTTTGTGAGGCTCAATATTTTCAAAGTGTCATGCGTGTTGGTTTCCAGCTAAGGTCAACTTTGGTGGCTGGTGTATTTTACAAGTCCCTAAGAGTAACTCATGAGGATCGTAGCAAGTTCTCATCAGGGAAGATCATGAATATGATAACAACAGATGCTAGTGCTCTACAGCAAATATGTCAGCAACTTCATGGAATATGGTCATCACCATTCCGTATCATATTGGCTATGGTTCTTCTATACCAGCAATTAGGTGTCGCTTCACTTATTGGTTTACTACTGCTAGTTCTCATGATCCCAGTGCAGACGATTGTTCTCAGCAAAATGCGAAAATTTATCAGGGAAGGACAACAGCAGACGGACAAGAGAGTTAGCCTCATGAATGAAATTCTGACTGCCATGGATACTGTAAAGTGTTATGCATGGGAGACAAGCTTTCAGTCTAGAGTTCAAAGCATACGAGATGATGAGCTTTTATGGTTCCGCCATGCACAACTTCTTTCTGCTCTCAACACTTTTATGCTGAACAGTATCCCAGTTCTTGTGTCTGTAACCACATTTGGAATGTTCACTTTACTTGGAGGAGAGTTAACACCTGCAAGGGCATTTACGTCTTTATCTCTATTTGCAGTTTTGCGTTATCCTTTAAATATGCTTCCTACTTTGTTAAGTCAGGTTGTAAGTGCAAATGTGTCATTGCAACGTTTACATGAACTATTCTTAACTGAGGAGCGAATTTTAAAACCCAATCCACCTCTTGTACCTGGACTTCCAGCCATATCCATCCAGAATGGATACTTCTCATGGGATACAAAGATGGAGAATCCTGTGTTATCGGATATAAACTTGGAAATACCCATTGGCAGCTTAATTGCAATAGTTGGTGGTACGGGACAAGGAAAAACGTCACTTGTGTCAGCAATGATTGGAGAACTTCCTCCTATTGCTAATACAAATGTTATAATCAGAGGCACTGTTGCTTATGTTCCTCAGATTTCATGGATTTTTAATGCTACAGTCCGTGAAAATATCCTATTTGGATCTAAGTTTGAATATGAACGGTATCAGAAGGCCATTGATGTTACTGAATTACAGCATGATATCAACTTACTTCCTGGACGCGATTTTACTGAGATTGGAGAAAGAGGAGTCAATATTAGTGGTGGACAAAAGCAGAGAGTTTCCTTGGCAAGAGCTGTATACTCAAATTCAGATGTGTACATATTTGATGACCCTTTAAGCGCCCTTGATAGTCATGTCGCCCAAAAGGTTTTCAAGAGCTGTATAAAGGATGGACTGCAAGGAAAAACAAGGATTCTTGTTACCAACCAACTTCATTTTCTCCCTCAGGTGGATCATATCATTCTGATTAGGGAAGGTGTGATCGAAGAGCAGGGTACCTTTGAGAAGCTATCTAAAAGTGGGCCGCTATTCCAGAAACTAATGGAAAATGCGGGCAAAATGGAAGAAAAACTAAATCATAAGATTGAAGATGTATATGATAAAACTACTTTTCTACCAGCTACCAATAATGTGATTTCAGAGACACCAAATGGTACAAGTCATAAAAAGAAGGGAAAATTGCAAAAGTCCATGCTTATTAAACAAGAAGAGCGGGAGACAGGAGTTGTTAGCTGGAAAGTTTTGACGAGGTACAAGTCTGCTTTGGGAGGACTTTGGGCAGTTTTAGTACTCTTCACATGCTATGTAATGACAGAAATTCTTCGACTTTCAAGTAGCACATGGTTATCTGTGTGGACTAGTAAAAGTACTGCGGCTGGTTACAAACAAGGATATTTTATTTCAATCTATGCATTTCTTTCATTTGGGCAGGTAGTTGTTACTCTTGCTAACTCTTATTGGCTGATCATTTCAAGTCTACGTGCTGCCAAAAGATTGCATGATGCCATGTTACATAATATACTGCACGCTCCAATGGTATTCTTTCATACTAATCCTGTTGGACGCATACTTAATAGGTTTGCGAGAGACCTGGGAGACATTGATCGCAATGTCGCTAATTTTGTGAATATGTTTATGGGTCAATTCTGGCAACTCCTTTCGACTTTTGTTCTTATTGGCACTGTGAGCTCATTATCCCTGTGGGCCATAATGCCGCTTCTGACCTTGTTTTTCGGAGCTTATTTGTATTACCAGACTACATCTCGTGAAGTGAAGAGGTTGGATTCAATTACAAGATCTCCCGTCTATGCACAGTTTGCAGAAGCATTGAATGGTTTGGCGAGCATTCGTGCTTACAAAGCATATGATAGGATGGCACACGTTAATGGAAGATACATGGACAATAATATTAGATTTACTCTGGTGAATATTAGTTCAAATCGGTGGCTCACCATAAGGTTGGAAACATTGGGCGGTCTCATGATTTGGTTGATAGCATCATTTGCTGTAATGCAGAATGCAACAGCCCAAAACCAAGCCATATTTGCATCTACAATGGGTCTACTTCTCACTTATTCCTTAAACATCACAAATATCTTGAGTCGTGTCCTTAGACAGGCTAGTAGTGCTGAAAATAGTTTAAATGCCGTAGAGCGTGTTGACACATACATAGAAATGGAAACTGAGGCTCCAGCTATTATTGAGACTAATCGGCCACCATCCGGATGGCCATCATCAGGATCAATTGAATTTGAGGATGTTGTCCTGAGGTACAGGCCTGAACTTCCTCCAGTCTTGCATGGCTTGTCTTTTAGAGTCTCTCCAACTGAGAAGGTGGGAATTGTTGGACGAACTGGTGCAGGAAAATCTAGTATGCTCAATGCATTATTCCGGATTGTGGAAATGCAAAAAGGAAGAATCACTATTGATGGTTATGATATTTCTAAATTTGGAGTTGAAGATTTACGAAAAGTTCTTACTGTCATACCACAATCACCGGTTCTTTTCTCTGGAACTGTTCGATTCAATCTTGATCCTTTTATGGAACATTCTGATGCTGAACTCTGGGAGGCTCTAGAAAGGGCGCATTTGAAAAGTGTGATCAGCAGAAATTCCCTTGGCCTAGATTATGAGGTTTCTGAACAAGGAGAAAACTTCAGTGTTGGGCAGAGACAACTGTTAAGTCTAGCTAGGGCCTTGATACGAAGATCGAAGATTCTTGTTCTGGATGAGGCTACTGCAGCAGTTGATGTTAGAACTGATGCCCTTATACAGAAAACTATTCGCCAAGAATTTAAGTCCTGCACAATGCTCATTATTGCACACAGACTAAATACAATCATTGACTGCAATCGAATTCTCGTCATTGATTCTGGCAAGGTTCTTGAATACAACACACCTCAGGAGCTTCTACTAGAAGAAGGAAGTGCATTTTACAAGATGGTTCAAAGTACTGGACCTGCAAATGCTCAGTACTTAAGTGGCCTAGCATTTGGAACAAATAATGAAAACTCTTGTGAAGAAAACAGGTAG 4500 0.3993 MAFEPLIWYCQPEKNIIWASLVDSAFGSYTPCAMNTLVISVSNLVLIGLCLYRIWLTISNAKAQRFHLSSNYYNYFLGLLAGYCAAQPLLRLIYGISDFNLNGKSDFAPFEITGLIIEALTWSSILILIVMETKIYIKQFRWYVRFGVFYVMVADLVMLNLRLSVINYCSRSALYLFISTMFCQVLFGILLVAYIPSLVPYAGYVTVQEDFQENAEYEPLCGEHQVCPERHVNVLSRLSYSWMTPLMRQGYRKPITEYDVWKLDTWDQTDTLFEKFLKCWTLECQRSRPWLLRALNNSLGKRFWWGGAYKICYDLSQFVGPILLNHLLQSMERGDPSWIGYIYAFSIFLGVSFGVLCEAQYFQSVMRVGFQLRSTLVAGVFYKSLRVTHEDRSKFSSGKIMNMITTDASALQQICQQLHGIWSSPFRIILAMVLLYQQLGVASLIGLLLLVLMIPVQTIVLSKMRKFIREGQQQTDKRVSLMNEILTAMDTVKCYAWETSFQSRVQSIRDDELLWFRHAQLLSALNTFMLNSIPVLVSVTTFGMFTLLGGELTPARAFTSLSLFAVLRYPLNMLPTLLSQVVSANVSLQRLHELFLTEERILKPNPPLVPGLPAISIQNGYFSWDTKMENPVLSDINLEIPIGSLIAIVGGTGQGKTSLVSAMIGELPPIANTNVIIRGTVAYVPQISWIFNATVRENILFGSKFEYERYQKAIDVTELQHDINLLPGRDFTEIGERGVNISGGQKQRVSLARAVYSNSDVYIFDDPLSALDSHVAQKVFKSCIKDGLQGKTRILVTNQLHFLPQVDHIILIREGVIEEQGTFEKLSKSGPLFQKLMENAGKMEEKLNHKIEDVYDKTTFLPATNNVISETPNGTSHKKKGKLQKSMLIKQEERETGVVSWKVLTRYKSALGGLWAVLVLFTCYVMTEILRLSSSTWLSVWTSKSTAAGYKQGYFISIYAFLSFGQVVVTLANSYWLIISSLRAAKRLHDAMLHNILHAPMVFFHTNPVGRILNRFARDLGDIDRNVANFVNMFMGQFWQLLSTFVLIGTVSSLSLWAIMPLLTLFFGAYLYYQTTSREVKRLDSITRSPVYAQFAEALNGLASIRAYKAYDRMAHVNGRYMDNNIRFTLVNISSNRWLTIRLETLGGLMIWLIASFAVMQNATAQNQAIFASTMGLLLTYSLNITNILSRVLRQASSAENSLNAVERVDTYIEMETEAPAIIETNRPPSGWPSSGSIEFEDVVLRYRPELPPVLHGLSFRVSPTEKVGIVGRTGAGKSSMLNALFRIVEMQKGRITIDGYDISKFGVEDLRKVLTVIPQSPVLFSGTVRFNLDPFMEHSDAELWEALERAHLKSVISRNSLGLDYEVSEQGENFSVGQRQLLSLARALIRRSKILVLDEATAAVDVRTDALIQKTIRQEFKSCTMLIIAHRLNTIIDCNRILVIDSGKVLEYNTPQELLLEEGSAFYKMVQSTGPANAQYLSGLAFGTNNENSCEENR 1499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1302 1499 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 229 1478 - -
Mibi03g1302 1499 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 918 1201 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi03g1302 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 609 838 IPR027417 -
Mibi03g1302 1499 Pfam ABC transporter 1255 1403 IPR003439 GO:0005524
Mibi03g1302 1499 SMART AAA_5 642 822 IPR003593 -
Mibi03g1302 1499 SMART AAA_5 1264 1443 IPR003593 -
Mibi03g1302 1499 CDD ABCC_MRP_domain1 615 815 - -
Mibi03g1302 1499 ProSitePatterns ABC transporters family signature. 1375 1389 IPR017871 GO:0005524|GO:0016887
Mibi03g1302 1499 SUPERFAMILY ABC transporter transmembrane region 290 599 IPR036640 GO:0005524|GO:0016020
Mibi03g1302 1499 Pfam ABC transporter transmembrane region 918 1162 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi03g1302 1499 Pfam ABC transporter transmembrane region 312 571 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi03g1302 1499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1230 1472 IPR027417 -
Mibi03g1302 1499 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 615 839 IPR003439 GO:0005524
Mibi03g1302 1499 Gene3D - 1221 1474 IPR027417 -
Mibi03g1302 1499 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524|GO:0016887
Mibi03g1302 1499 FunFam ABC transporter C family member 2 279 600 - -
Mibi03g1302 1499 SUPERFAMILY ABC transporter transmembrane region 914 1218 IPR036640 GO:0005524|GO:0016020
Mibi03g1302 1499 FunFam Multidrug resistance-associated protein member 4 1222 1474 - -
Mibi03g1302 1499 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 304 583 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi03g1302 1499 FunFam ABC transporter C family member 2 609 854 - -
Mibi03g1302 1499 Pfam ABC transporter 633 768 IPR003439 GO:0005524
Mibi03g1302 1499 FunFam ABC transporter C family member 2 881 1219 - -
Mibi03g1302 1499 Gene3D - 611 860 IPR027417 -
Mibi03g1302 1499 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1238 1472 IPR003439 GO:0005524
Mibi03g1302 1499 CDD ABC_6TM_ABCC_D1 305 591 IPR044746 GO:0140359
Mibi03g1302 1499 CDD ABC_6TM_ABCC_D2 917 1213 IPR044726 GO:0140359
Mibi03g1302 1499 Gene3D ABC transporter type 1, transmembrane domain 879 1219 IPR036640 GO:0005524|GO:0016020
Mibi03g1302 1499 Gene3D ABC transporter type 1, transmembrane domain 285 601 IPR036640 GO:0005524|GO:0016020
Mibi03g1302 1499 CDD ABCC_MRP_domain2 1236 1456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1302 Mibi-ChrMibi03 31746149 31770933 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1302 576 831 Calmodulin-binding Proteins AT2G36910 27.372 9.90e-25 110