Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1300 ATGCGAAAATTCATCAGGGAAGGACAACAGCAGACGGACAAGAGAGTTAGCCTCATGAATGAAATTCTGACTGCCATAGATACTGTAAAGTGTTATGCATGGGAGACAAGCTTTCAGTCTAGAGTTCAAAGCATACGAGATGATGAACTTTTATGGTTCCGCCATGCACAACTTCTATCTGCTCTTAACACTTTTATGCTGAACAGTATCCCAGTTCTTGTGACCGTAATCACATTTGGAATGTTCACTTTACTTGGAGGAGTGTTGACACCTGCAAGAGCGTTTACGTCTTTATCTCTATTTGCAGTTTTGCGTGTTCCTTTAAATATGCTTCCTAGTTTGTTAAGTCAGGTTGCAAGTGCAAATGTATCATTGCAACGTTTGCAGGAACTATTTTTAACTGAGGAGCGAATTTTAAAACCCAATCCACCTCTTGTTCCAGGACTTCCAGCCATATCCATCCAGAATGGATACTTTTCATGGGATACAAAGACGGAGGATCCCGTGTTATCAGATATAAACTTGGAAATACCCATTGGCAACTTAGTTGCAATAGTTGGTGGTACGGGACAAGGAAAAACATCACTTGTGTCAGCAATGATTGGGGAACTTCCTCCTATTGGTAATGCTAATGTTATAATCAGAGGCGCTGTTGCTTATGTTCCTCAGATTTCATGGATTTTTAATGCTACAGTCCGTGAAAATATCCTATTTGGATCTAAGTTTGAATATGAACGGTATCAGAAGGCAATTGATGTCACTGAATTACAGCATGATATCAACTTACTTCCTGGACGCGATTTTACAGAGATTGGAGAAAGAGGAGTCAATATCAGTGGTGGACAGAAGCAGAGAGTTTCCTTGGCAAGAGCTGTATACTCAAATTCAGATGTGTATATATTTGATGACCCTTTAAGTGCCCTTGATAGTCATGTTGCAGAAAAGGTTTTCAAGAGCTGTATTAAGGAAGGACTGCAAGGAAAAACAAGGATTCTTGTTACGAACCAACTTCATTTCCTCCCTCAGGTGGATCACATCATTCTGATTAGGGAAGGTGTGATCAAAGAGCAGGGAACATTTGAGAAGCTATCTAAAAGTGGGCCACTATTCCAGAAACTAATGGAAAATGCGGGCAAGATGGAAGAAAAACTAAATCATAAGATTGAAAAAGATGTATATGATAAAAACAATTTGGTACCAGCAACCAATGATTTGATTTTAGAGACACCAAATGGTACAAGCCATGAAAAGAAAGGAAAATTGCAAAAATCTATGCTTATTAAACAAGAAGAGCGCGAGACAGGAGTTGTTAGCTGGAAAGTTTTGACGAGGTATGAGTAA 1341 0.3922 MRKFIREGQQQTDKRVSLMNEILTAIDTVKCYAWETSFQSRVQSIRDDELLWFRHAQLLSALNTFMLNSIPVLVTVITFGMFTLLGGVLTPARAFTSLSLFAVLRVPLNMLPSLLSQVASANVSLQRLQELFLTEERILKPNPPLVPGLPAISIQNGYFSWDTKTEDPVLSDINLEIPIGNLVAIVGGTGQGKTSLVSAMIGELPPIGNANVIIRGAVAYVPQISWIFNATVRENILFGSKFEYERYQKAIDVTELQHDINLLPGRDFTEIGERGVNISGGQKQRVSLARAVYSNSDVYIFDDPLSALDSHVAEKVFKSCIKEGLQGKTRILVTNQLHFLPQVDHIILIREGVIKEQGTFEKLSKSGPLFQKLMENAGKMEEKLNHKIEKDVYDKNNLVPATNDLILETPNGTSHEKKGKLQKSMLIKQEERETGVVSWKVLTRYE 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1300 446 Gene3D ABC transporter type 1, transmembrane domain 1 138 IPR036640 GO:0005524|GO:0016020
Mibi03g1300 446 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 4 445 - -
Mibi03g1300 446 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 120 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi03g1300 446 ProSitePatterns ABC transporters family signature. 278 292 IPR017871 GO:0005524|GO:0016887
Mibi03g1300 446 CDD ABCC_MRP_domain1 152 352 - -
Mibi03g1300 446 Pfam ABC transporter transmembrane region 2 108 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Mibi03g1300 446 FunFam ABC transporter C family member 2 146 392 - -
Mibi03g1300 446 SUPERFAMILY ABC transporter transmembrane region 1 136 IPR036640 GO:0005524|GO:0016020
Mibi03g1300 446 Pfam ABC transporter 170 305 IPR003439 GO:0005524
Mibi03g1300 446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 375 IPR027417 -
Mibi03g1300 446 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 152 376 IPR003439 GO:0005524
Mibi03g1300 446 SMART AAA_5 179 353 IPR003593 -
Mibi03g1300 446 Gene3D - 148 400 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1300 Mibi-ChrMibi03 31662816 31667253 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1300 146 420 Calmodulin-binding Proteins AT2G36910 26.804 1.42e-25 108