Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1299 ATGATTTGGTTGATAGCAGCATTTGCTGTAATGCAGAATGCAACTGCCCAAAACCAAGCCATATTTGCATCTACAATGGGTCTACTTCTCACTTATTCCTTAGACATCACAAATATCTTGGGTCGTGTCCTTAGACAGGCTAGTAGTGCTGAAAATAGTTTAAATGCCGTAGAGCGTGTTGACACATACATAGAAATGGAAACTGAGGCTCCATCTATTATTGAAACCAACCGGCCACCACCTGGATGGCCATCATCAGGATCAATTGAATTTGAGGATGTTGTTCTGCGGTACAGGCCTGAGCTTCCTCCAGTCTTGCATGGCTTGTCTTTTAGAGTCTCTCCAACTGAGAAGGTGGGAATTGTTGGACGAACTGGTGCAGGAAAATCTAGTATTCTCAATGCTTTATTCCGGATTGTGGAACTGCAAAAAGGAAGAATCATTATTGATGGTTGTGATATTTCTAAATTTGGAGTTGAAGATTTACGAAAGGTTCTTACTGTCATACCACAATCTCCGGTTCTTTTCTCTGGAACTGTTCGATTCAATCTTGATCCTTTTATGGAACACACTGATGCTGAGCTCTGGGAAGCTCTAGAAAGGGCGCATTTGAAAAGTGTGATCAGCAGAAATTCCCTTGGCCTAGATTATGAGGTTTCTGAACAAGGAGAAAACTTCAGTGTTGGGCAGAGACAATTGTTAAGTCTAGCTAGGGCTTTGATACGCGGGTCGAAGATTCTTGTTCTTGATGAAGCTACTGCTGCAGTTGATGTTAGAACTGATGCCCTTATACAGAAAACAATTCGCCAAGAATTTAAGTCCTGCACAATGCTCATTATTGCACACAGACTAAATACAATCATTGACTGCAATCGAATTCTCGTCATTGATTCTGGCAAGGTTCTTGAATACAGCACACCTCAGGAGCTTCTACAAGAAGAAGGAAGTGCATTTTACGAGATGGTTCAAAGTACTGGACCTGCAAATGCTCAGTACTTACGTGGCCTAGCATTCGGAACAAATAATGAAAATTCTTGTGAAGAGAACAGGTTATGA 1056 0.4148 MIWLIAAFAVMQNATAQNQAIFASTMGLLLTYSLDITNILGRVLRQASSAENSLNAVERVDTYIEMETEAPSIIETNRPPPGWPSSGSIEFEDVVLRYRPELPPVLHGLSFRVSPTEKVGIVGRTGAGKSSILNALFRIVELQKGRIIIDGCDISKFGVEDLRKVLTVIPQSPVLFSGTVRFNLDPFMEHTDAELWEALERAHLKSVISRNSLGLDYEVSEQGENFSVGQRQLLSLARALIRGSKILVLDEATAAVDVRTDALIQKTIRQEFKSCTMLIIAHRLNTIIDCNRILVIDSGKVLEYSTPQELLQEEGSAFYEMVQSTGPANAQYLRGLAFGTNNENSCEENRL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1299 351 ProSitePatterns ABC transporters family signature. 226 240 IPR017871 GO:0005524|GO:0016887
Mibi03g1299 351 CDD ABCC_MRP_domain2 87 307 - -
Mibi03g1299 351 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 89 323 IPR003439 GO:0005524
Mibi03g1299 351 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 329 - -
Mibi03g1299 351 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 79 323 IPR027417 -
Mibi03g1299 351 SMART AAA_5 115 294 IPR003593 -
Mibi03g1299 351 FunFam Multidrug resistance-associated protein member 4 73 325 - -
Mibi03g1299 351 Gene3D ABC transporter type 1, transmembrane domain 1 70 IPR036640 GO:0005524|GO:0016020
Mibi03g1299 351 Pfam ABC transporter 106 254 IPR003439 GO:0005524
Mibi03g1299 351 Gene3D - 72 325 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1299 Mibi-ChrMibi03 31651533 31654625 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1299 86 331 Calmodulin-binding Proteins AT2G36910 30.620 4.26e-32 125