Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1270 ATGGCTGAGACCTCTGCAACTAATGGAACCCATGAGATTGTTCTTGATGTCAATAATGGCAAATCCAATGAAGGCCGCTCCATCATCTTTGTCTCTTTTCCGTTCATACAGAAGTTGGTGGCAGAGTTGGTGGGGACATACTTTCTACTATTTTTAGGTGGAGCAACAATAGTGGTGAACATTAACAACAACAACATCGTAACACTTCCTGGGATTGCCATCGTTTGGGGTCTTCTGGTTATGGCTCTTGTTTACTCTCTTGGTCACATCTCTGGTGCCCATTTCAATCCTGCTGTCACTCTCGCTTTTGCATCTACTAAACAATTTCCCCTCAAACAGGTACCAGCTTATATAGTAACTCAGGTTATAGGATGCATTCTTGCAAGTGAGACTGTGAGACTTATTTTCACAGGAAAACATGACCAATTCATAGGAACAGTATTATCTGGATCATATATTCAGGGCTTTGTGGTTGAGTTCTTAATCACCTTTTTCCTCATGTTTGTCATTTCTGGTGTGGCAACTGATAGCAGAGCGATTGGTGAACTAGCTGGGATCGTCGTTGGGGCAACCGTGATGCTTAATGTGTTGGCTGCCGGGCCCATAACCCGAACATCAATGAATCCGGCGAGAAGCCTAGGGCCGGCAATCGTATGGCATGAGTACAGAGGATTGTGGGTGTATATGACAGCACCGGTGGCGGGTGCGGTGGCAGGGGCATGGGTGTATAACTTCATAAGGTATACAGACAAGCAAAAACATGAGACTGCAAAGAGTACTACTTCTTTTCTCAAAGCTTCAAGCTGCTGTGGTGGTGCCTCCAAGTGA 828 0.4529 MAETSATNGTHEIVLDVNNGKSNEGRSIIFVSFPFIQKLVAELVGTYFLLFLGGATIVVNINNNNIVTLPGIAIVWGLLVMALVYSLGHISGAHFNPAVTLAFASTKQFPLKQVPAYIVTQVIGCILASETVRLIFTGKHDQFIGTVLSGSYIQGFVVEFLITFFLMFVISGVATDSRAIGELAGIVVGATVMLNVLAAGPITRTSMNPARSLGPAIVWHEYRGLWVYMTAPVAGAVAGAWVYNFIRYTDKQKHETAKSTTSFLKASSCCGGASK 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1270 275 Pfam Major intrinsic protein 32 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi03g1270 275 TIGRFAM MIP: MIP family channel proteins 41 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi03g1270 275 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Mibi03g1270 275 Gene3D Glycerol uptake facilitator protein. 12 261 IPR023271 -
Mibi03g1270 275 PRINTS Major intrinsic protein family signature 226 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi03g1270 275 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi03g1270 275 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi03g1270 275 PRINTS Major intrinsic protein family signature 189 211 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi03g1270 275 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi03g1270 275 PRINTS Major intrinsic protein family signature 158 176 IPR000425 GO:0015267|GO:0016020|GO:0055085
Mibi03g1270 275 PANTHER AQUAPORIN NIP2-1 22 259 IPR034294 -
Mibi03g1270 275 SUPERFAMILY Aquaporin-like 30 256 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1270 Mibi-ChrMibi03 30679026 30682068 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1270 18 275 Major Intrinsic Protein MIP AT5G37820 53.435 2.01e-89 266