Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1251 ATGTCGAGGTCTGTCCTCTCAACTTTCAAGGCCAAAGAGGAAGAAATTGAGAGGAAGAAGATGGAGGTGAGAGACAGGGTTCAGGCTCAGTTGGGTCATGTCGAGGAAGGAACCAAGCGCTTCGCCTTGACTCATGAGTTAGGTCTTAGGCCTAGGCAAGTGGAGGTGTGGTTTCAGAACAGAAGAGCAAGAACAACAATTTCAGGAGCTCTCCATTCTTGTCTCACGCCATGCTAG 237 0.4937 MSRSVLSTFKAKEEEIERKKMEVRDRVQAQLGHVEEGTKRFALTHELGLRPRQVEVWFQNRRARTTISGALHSCLTPC 78
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1251 78 Pfam Transcriptional activator 1 46 IPR007033 -
Mibi03g1251 78 SUPERFAMILY Homeodomain-like 38 64 IPR009057 -
Mibi03g1251 78 CDD homeodomain 43 64 IPR001356 GO:0003677
Mibi03g1251 78 Pfam Homeodomain 39 64 IPR001356 GO:0003677
Mibi03g1251 78 Gene3D - 33 65 - -
Mibi03g1251 78 PRINTS Lambda-repressor HTH signature 48 64 IPR000047 GO:0003677
Mibi03g1251 78 PRINTS Lambda-repressor HTH signature 39 48 IPR000047 GO:0003677
Mibi03g1251 78 ProSiteProfiles 'Homeobox' domain profile. 39 68 IPR001356 GO:0003677
Mibi03g1251 78 PANTHER RAB6-INTERACTING PROTEIN GORAB 1 46 IPR007033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1251 Mibi-ChrMibi03 29798869 29799443 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1251 42 67 Homeobox Transcription Factor Family AT4G37790 76.923 2.39e-08 47.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Mibi03g1251 Transcrip_act 1.1e-16 No_clan