Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1243 ATGTTCAAACTCAAGCACCATACACCATGTTTCTTCCATCTTCTTCTTCTTCTGATCTCCTGTGATTCATCTCTCGCCGTCGATTTCATCTTCAACGGCTTCTCTTCCTCCTCCGGTGACATCTTACTCTATGGTAACGCCACCATAGATTCTGGAATCTTATCTCTAACTCATGACCAAACTTTCTCTATTGGTCGTGCTCTTTATTCTCACAAGATTCCCACCAAGATTTCTAATTCTTCATATGTACACCCTTTTTCCACTTCCTTCATTTTCGCCATGGCTCCTTATAAGAATATTCTTCCCGGCCATGGATTCGTCTTCATGTTCACGCCTGTTAGAGGAATCCAGGGTACAAGTTCTGCTCAAAATTTGGGTTTCCTTAACTTCACCAACAATGGCGATTCCAACATCCACGTGTTCGGTGTTGAGTTTGATGTGTTCATGAATCAAGAATTTGATGACATAAACGACAATCACGTTGGGGTCAATGTGAACTCTCTGAAATCTTCCGCAGCAAACGACGCTGGGTATTGGCCAGACTCAAACGACATGTCGTTTCAAGAATTGAGGCTGAACAACGGTGAGAATTACCAGGTTTGGATCGATTATAAAGATTCCTTCATTAACGTAACTATGGCTAGAGTAGGTACAAAACGACCACGTAGGCCATTGTTGAATGTGTCGTTGAACTTATCTGAAGTTTTTGAAGATGAAATGTATGTGGGATTTACAAGTGCCACTGGGCAATTAGTTCAAAGTCACAAGATTTTGGCTTGGAGCTTTAGTAATTCAAATTTTTCACTAAGTGAAGCGTTAATTACTTCTGGGTTACCATCTTTTGTTCTTCCAAAAGATTCAATCGTTAAATCCACAGGATTCATCGCCGGATTGACTATTGGGATTTTCTTCATACTCTCTTTCATTGTTCTGTTTACCCTGTTTATAATACAGAGGAAACAGAGGAAAGCGAGGGAAAGAGAATCAATGGAGGATTGGGAATTAGAGTACTGGCCACATAGAATAACCTATGAAGAAATCGAATCAGCAACAAAAGGATTCTCTGAGGAAAACGTGATTGGAGTCGGAGGAAATGGGAAGGTATACAAAGGAATTCTAGGAGAATCAGAAATTGCAGTCAAACGAATCTCCCATGAGAACAATGGAACAAGAGAATTCCTAGCAGAAATCGCTAGTTTAGGAAGACTCAAACACAGGAATCTGGTAAGATTACGAGGATGGTGTAAGAAAGACACAGGAAATTTCTTACTAATATATGACTATATGGAAAATGGAAGTTTAGACAAAAGGGTATTTGAAAACGAGGAAGAAGACAAGATACTAAATTGTGAGCAGAGGATAAGGATTCTGAAGGATGTGGCAAATGGGGTAATGTATTTGCATGAAGGGTGGGAAGTGAAAGTGGTACACAGAGATATTAAAGCGAGTAATGTGTTGTTAGATAAGGAGCTTAATGGAAGGTTGGGTGATTTTGGGTTAGCTTTAATGCATAACAATAATAATGGTGAAGTAGCTGGGACCACTAAAGTGGTTGGAACGGTGGGTTACATGGCGCCAGAAATGATGAAGACAGGAAGAGCATCTACTCAGAGTGATGTTTACATGTTTGGAATATTGATTTTGGAGGTCATTTGTGGGAGGAGACCTATTGAGGAAGGGAAGCCATCTTTGGTGGAGTGGGTGTGGCAACTCAAAGCACAAGGACAACTAATAAATGCAATGGATGAGAGATTGAAGGCAAAAGGAGAGGTGAATGAAGAACAAGTAGAAACACTTCTTAACTTGGGATTGTTATGTGCTTATCCTGATCCAAAGGCCAGGCCAACAATGAGACAAGCACTGAAAGTTTTAGAGGGTAAGAACAACAACAATAATAATACTGAAGATGGTGGAGAGTATGATCAAAGTGAAGATATGGATACATATTTGCTTACGGACATTAGGGCACCAAGAGACTTATGGTCTGAGTATTCTCATTACTTAAACTTCACATCTCACCCAACATTTGAAGATGTTAGACTCACTACTGCTTATACTTCCTCCACATCTCATTGCACTTCATCTAATTCTATTCTTGAGGGGAGATAG 2109 0.4002 MFKLKHHTPCFFHLLLLLISCDSSLAVDFIFNGFSSSSGDILLYGNATIDSGILSLTHDQTFSIGRALYSHKIPTKISNSSYVHPFSTSFIFAMAPYKNILPGHGFVFMFTPVRGIQGTSSAQNLGFLNFTNNGDSNIHVFGVEFDVFMNQEFDDINDNHVGVNVNSLKSSAANDAGYWPDSNDMSFQELRLNNGENYQVWIDYKDSFINVTMARVGTKRPRRPLLNVSLNLSEVFEDEMYVGFTSATGQLVQSHKILAWSFSNSNFSLSEALITSGLPSFVLPKDSIVKSTGFIAGLTIGIFFILSFIVLFTLFIIQRKQRKARERESMEDWELEYWPHRITYEEIESATKGFSEENVIGVGGNGKVYKGILGESEIAVKRISHENNGTREFLAEIASLGRLKHRNLVRLRGWCKKDTGNFLLIYDYMENGSLDKRVFENEEEDKILNCEQRIRILKDVANGVMYLHEGWEVKVVHRDIKASNVLLDKELNGRLGDFGLALMHNNNNGEVAGTTKVVGTVGYMAPEMMKTGRASTQSDVYMFGILILEVICGRRPIEEGKPSLVEWVWQLKAQGQLINAMDERLKAKGEVNEEQVETLLNLGLLCAYPDPKARPTMRQALKVLEGKNNNNNNTEDGGEYDQSEDMDTYLLTDIRAPRDLWSEYSHYLNFTSHPTFEDVRLTTAYTSSTSHCTSSNSILEGR 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1243 702 CDD lectin_legume_LecRK_Arcelin_ConA 27 260 IPR001220 GO:0030246
Mibi03g1243 702 Gene3D Phosphorylase Kinase; domain 1 315 428 - -
Mibi03g1243 702 ProSitePatterns Protein kinases ATP-binding region signature. 360 381 IPR017441 GO:0005524
Mibi03g1243 702 Pfam Protein kinase domain 355 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1243 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 475 487 IPR008271 GO:0004672|GO:0006468
Mibi03g1243 702 SUPERFAMILY Protein kinase-like (PK-like) 330 628 IPR011009 -
Mibi03g1243 702 FunFam L-type lectin-domain containing receptor kinase S.4 429 636 - -
Mibi03g1243 702 Gene3D - 26 272 - -
Mibi03g1243 702 ProSiteProfiles Protein kinase domain profile. 354 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1243 702 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Mibi03g1243 702 FunFam L-type lectin-domain containing receptor kinase S.4 25 270 - -
Mibi03g1243 702 CDD STKc_IRAK 360 626 - -
Mibi03g1243 702 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 316 428 - -
Mibi03g1243 702 Pfam Legume lectin domain 27 266 IPR001220 GO:0030246
Mibi03g1243 702 SMART serkin_6 354 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1243 702 PANTHER - 46 628 - -
Mibi03g1243 702 Gene3D Transferase(Phosphotransferase) domain 1 429 649 - -
Mibi03g1243 702 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 265 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1243 Mibi-ChrMibi03 29437797 29441436 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1243 26 571 Receptor kinase-like Gene Family AT4G04960 64.299 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mibi03g1243 Pkinase 1.8e-46 CL0016