Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1242 ATGGAGGAAAACCCTAGTTCATCATCCAGAACTACTGACAGAAAATTCATCGAAAGGAATCGGAGATATCAAATGAAAGCTCTCTACTCCAAGCTCAAATCTCTTGTTCCTCATCAAACTCCAAGGGAGGCTATTCCAATACCTAATCAGTTAGAGGAAGCAACCAATTACATCAAGAAGTTACAGATGAAATTGGAGAAAATGAAGGAGAAGAAGGACAACCTTCTAATTGCAAATAATCAAAGGTCCAATTTTAACAAACATACAAACATGATTAAGAGATCATCAAAATCACCACCATGGTTTGAGATCAGAGAAGTGGGTACTATAGCCTTACAAGTTGTTCTGAGATCTGAATTGGATAGTGAATTTTCGTTCACTGATATTATTCGACTTCTTCATGAGGAAGGAGCAGATATTGTTAATGCCAACTACACAGTTGTTGAAGATGTAGTCATTCATACTATTCACTGTGAGGCAAAGGAATCGGTCAACGTTGCTGCGATGATATCCGAGAGATTAAGGAGATTTTAA 534 0.3745 MEENPSSSSRTTDRKFIERNRRYQMKALYSKLKSLVPHQTPREAIPIPNQLEEATNYIKKLQMKLEKMKEKKDNLLIANNQRSNFNKHTNMIKRSSKSPPWFEIREVGTIALQVVLRSELDSEFSFTDIIRLLHEEGADIVNANYTVVEDVVIHTIHCEAKESVNVAAMISERLRRF 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1242 177 Pfam Helix-loop-helix DNA-binding domain 15 62 IPR011598 GO:0046983
Mibi03g1242 177 Gene3D - 2 93 IPR036638 GO:0046983
Mibi03g1242 177 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 7 78 IPR036638 GO:0046983
Mibi03g1242 177 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 61 IPR011598 GO:0046983
Mibi03g1242 177 Coils Coil 51 78 - -
Mibi03g1242 177 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 176 IPR015660 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1242 Mibi-ChrMibi03 29394076 29396168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1242 6 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 40.782 8.14e-41 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mibi03g1242 HLH 3.9e-08 No_clan