Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1235 ATGAGTACTCATTCTACTGGGGATCATGCTCCTACAAGTCACCGGCGAAGGGAGATTATTGATCTTAATAGGGCTCCACCTGGTGCAATTCCAGAGCAGGAGGGAACTCAAGTTTCTGATGACGCTGTTCAGCAACCACACTTAATTCAACAACCTATTGATGTGGAGACTTTTGATGATGATGTTATTTTATCTACACAAAGTGATTTTCTTGAGGCTAAAAACAATTCAAGAAGGCATCGCGGGAGGACTATTGTTGATGTGGACTTATTAGAGTATCCACGTCGAGCTGCTGCAATCACTTCCGACAATCGGAGAAGAGATTCTCCAAATCAAATCATTCCTAATTGTGATCCACATATGGAATTGGAAGGAGGTGGTAGTTCTCAGGAGAAAGAAAGGACACCTGAACTGCCAAAAGAAAAGGTCTTTACCTGTCCAATATGTATGGAACCATTTGTGGAAGAAGTGTCAACAAAGTGTGGCCATATATTTTGTAAGGGATGCATTAAGGCTGCCATAAAAGCACAAGGAAAGTGCCCTACATGTAGGGTCAAGGTCACTGCAAGAGGGCTGATAAGGGTGTTTCTACCATCTGCATCTTCTCCTTAG 612 0.4281 MSTHSTGDHAPTSHRRREIIDLNRAPPGAIPEQEGTQVSDDAVQQPHLIQQPIDVETFDDDVILSTQSDFLEAKNNSRRHRGRTIVDVDLLEYPRRAAAITSDNRRRDSPNQIIPNCDPHMELEGGGSSQEKERTPELPKEKVFTCPICMEPFVEEVSTKCGHIFCKGCIKAAIKAQGKCPTCRVKVTARGLIRVFLPSASSP 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1235 203 ProSitePatterns Zinc finger RING-type signature. 161 170 IPR017907 -
Mibi03g1235 203 SUPERFAMILY RING/U-box 145 189 - -
Mibi03g1235 203 MobiDBLite consensus disorder prediction 102 136 - -
Mibi03g1235 203 ProSiteProfiles Zinc finger RING-type profile. 146 184 IPR001841 -
Mibi03g1235 203 SMART ring_2 146 183 IPR001841 -
Mibi03g1235 203 PANTHER ELFLESS, ISOFORM B 1 199 - -
Mibi03g1235 203 Pfam Ring finger domain 145 184 IPR001841 -
Mibi03g1235 203 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 200 IPR013083 -
Mibi03g1235 203 MobiDBLite consensus disorder prediction 1 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1235 Mibi-ChrMibi03 29062315 29065703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1235 13 199 C3H Transcription Factor Family AT5G48655 45.274 7.66e-44 144