Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1229 ATGGAAACAAGCAGGGCTGAGGGAAAGAGGAGCTCGAGGCACAAAAAAGAGGAATCAGAGGAAGATGAAGAGGAAGAAGTAGAAGAAGATAATGATGATGAAGAAGAAGAAGAAGAAGAAGAAGACACAGAAAGTGAAGTTGGCTCTGGAGAAGAACATGGAAGAAAGAGAAGGGTCATTTCAAACACTCACAATAGTGGGAGACACCCCAAACAAGGAAGCTCCTCCACGGCGGCGCCACCGTGTTGTCAGGCCGACGATTGCCGGACCGATCTGACCGGTGCCAAAACATATCACCGGCGGCATAAAGTCTGTGAGCACCATTCTAAAGCACCGGCAGTTCTCGTTTCTGGGAAAGAACAACGATTTTGCCAGCAATGTAGTAGGTTTCATGAGCTTCCAGAGTTTGACAACGCAAAACGGAGTTGCAGAAGGCGTTTGGCAGGGCATAATGAGAGACGGCGAAAGGTTTCATCTGATTAA 483 0.4783 METSRAEGKRSSRHKKEESEEDEEEEVEEDNDDEEEEEEEEDTESEVGSGEEHGRKRRVISNTHNSGRHPKQGSSSTAAPPCCQADDCRTDLTGAKTYHRRHKVCEHHSKAPAVLVSGKEQRFCQQCSRFHELPEFDNAKRSCRRRLAGHNERRRKVSSD 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1229 160 ProSiteProfiles Zinc finger SBP-type profile. 80 157 IPR004333 GO:0003677
Mibi03g1229 160 MobiDBLite consensus disorder prediction 65 81 - -
Mibi03g1229 160 Gene3D - 73 144 IPR036893 GO:0003677|GO:0005634
Mibi03g1229 160 MobiDBLite consensus disorder prediction 1 85 - -
Mibi03g1229 160 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 30 156 IPR044817 GO:0003677
Mibi03g1229 160 MobiDBLite consensus disorder prediction 21 47 - -
Mibi03g1229 160 MobiDBLite consensus disorder prediction 1 20 - -
Mibi03g1229 160 FunFam Squamosa promoter-binding-like protein 14 74 144 - -
Mibi03g1229 160 Pfam SBP domain 83 156 IPR004333 GO:0003677
Mibi03g1229 160 Coils Coil 13 44 - -
Mibi03g1229 160 SUPERFAMILY SBT domain 80 158 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1229 Mibi-ChrMibi03 28834724 28837900 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1229 73 160 SBP-box Gene Family AT3G15270 68.539 6.36e-39 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Mibi03g1229 SBP 1.3e-32 No_clan