Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1224 ATGGCCTCCATTTTTACAATGTCTCAGTCCCGCAAAACTTTCTCTTTCCTCTTCTCCTTTCTTCTTCACTTCCTCTTTTCAAAATCACAAACCACTGAACTCCACAACGCTTGCTCTCCCACCAAAACCTTCACACCAAACAGCTCCTTCCACTCCAACCTCGCCACCCTCTTCTCCTCCTTATCCTCCGCCAACACCGACTTCTACAACACCACCATGGCCAGCTCCACCGGCGGGGCCCACGGCGACGACACCGTCTACGGCCTCTTCATGTGCCGTGGTGACGTCACCCTCCAAGTTTGCCGCCAATGCGTTGGTACCGCCGTCCAACGGTTACCCTCCGTTTGTGGATCATCCAAAGAGGCCATAATCTGGTACGACGAGTGCATGCTTCGCTACTCCGACCGGCCTTTTTTCGCGACGGCCGCCACGAGCCCCGGCGCCGGTTTTCCCCTATGGAACACCGGAAATGTCTCCGGCGAGGCGAACTTTACAAGCGTAAAGTTCGCCACGTTGAATGAGACGGCGGATGAGGCGGCGGCGGTTGGGAAACATGGTGGTTTGGGAGGGATTAAGAAGAAGTATGCAACGAAAGAAGTTAATATTTCGGGGTTTCATCAAACTTTGTATTGTTTGGCTCAGTGTACGCCGGATATTTCGCCAGAGGGTTGTAGGAAGTGTTTGGGTGGTGCAATTGGTGGGATTTCATTGTGTTGTGATGGTAAGGCTGGAGGGAGAGTTTTGTATCCAAGTTGTAATGTTCGTTATGAAGTGTTTCGGTTTTATCGTTCTGTTGATCAACTTGTTGGGACGCCACCGGCGGCGACTTTTCCTTCTCCTCCGGCAATGTCTTCAGATCCCAGAGTGAAAGGTAAAGGCAAACCAGCACCAATTATTGTGATAGTTGTGGTTTGTCTTGTTGGTACGGGAATAATTTTTGGTTTCGCCTACTATCTCTTAAAGAAATACATGAAGAGTCGTAGGGCTGTTCTAAGGCAAAAATACTGCACCAGTTTAGAGCCTCTGGAATTCAATTTGGCTACCATTGAATCTGCGACAAATAAATTTTCAGAGGAAAATAGACTAGGCAAAGGTGGCTTTGGACAAGTTTATAAGGGTAATCTTTCAAGCGGTCAAATTATAGCTGTGAAGAGACTTTCTGAAGATTCTGGTCAAGGAGCAGAAGAATTTAAGAATGAAGTACTATTAATAGCCAGACTCCAGCACAGAAATCTGGTGACATTATTAGGATTTTGTATAGAACAGCAAGAAAAAATTCTTGTATATGAATATATTCCTAACCGAAGCCTTGACTATTTTCTATTTGATTCCAATAGGAGCAGAATACTAAATTGGTTGGAACGCTACAAAATCATTGGAGGAATTGCTCAAGGGATTCTTTATCTACATGAACATTCTCGCCTTAAAATTATACACCGTGATCTCAAACCCAGCAATATTTTGTTAGATGATGAAATGAATCCAAAAATTTCAGATTTTGGATTAGCTAAGATGGTTGCCATCACTGAAAATGAGGGAAATACGAAAAGAATTGCCGGAACTTATGGTTATATGCCTCCAGAATATGCAATGTTCGGACATTATTCTGAAAAATCAGATGTTTTTAGTTTTGGGGTTATAGCTTTAGAAATCATCAGTGGAAGAAAGAATACAAATTATCATGAACTATCAAAAGATTCTTACAGTCTCATAAGCTTTGTTTGGAATCTATGGAGGGATGAAAAATTGTTGGAGATATTAGATCCAAACCTTAAAGAATTTGGATCATATAATGAAGTGATAAAAAGCATCCACATTGGTTTATTATGTGTTCAAAAGAATCCAGACTTGAGGCCTTCCATGGCCAAAGTTATTCATTATCTTACTACTGATTCTATTCAATTGCCATTTCCTCAAGAACCTGCATTCCTTCTACGCGGTCAAATGAATCAATCTACCTCTGGATCTGGAACTAATGAATCATATTCTACCAATGAAGTGTCTGCGAGTACATTCTTTCCTCGCTAG 2028 0.4265 MASIFTMSQSRKTFSFLFSFLLHFLFSKSQTTELHNACSPTKTFTPNSSFHSNLATLFSSLSSANTDFYNTTMASSTGGAHGDDTVYGLFMCRGDVTLQVCRQCVGTAVQRLPSVCGSSKEAIIWYDECMLRYSDRPFFATAATSPGAGFPLWNTGNVSGEANFTSVKFATLNETADEAAAVGKHGGLGGIKKKYATKEVNISGFHQTLYCLAQCTPDISPEGCRKCLGGAIGGISLCCDGKAGGRVLYPSCNVRYEVFRFYRSVDQLVGTPPAATFPSPPAMSSDPRVKGKGKPAPIIVIVVVCLVGTGIIFGFAYYLLKKYMKSRRAVLRQKYCTSLEPLEFNLATIESATNKFSEENRLGKGGFGQVYKGNLSSGQIIAVKRLSEDSGQGAEEFKNEVLLIARLQHRNLVTLLGFCIEQQEKILVYEYIPNRSLDYFLFDSNRSRILNWLERYKIIGGIAQGILYLHEHSRLKIIHRDLKPSNILLDDEMNPKISDFGLAKMVAITENEGNTKRIAGTYGYMPPEYAMFGHYSEKSDVFSFGVIALEIISGRKNTNYHELSKDSYSLISFVWNLWRDEKLLEILDPNLKEFGSYNEVIKSIHIGLLCVQKNPDLRPSMAKVIHYLTTDSIQLPFPQEPAFLLRGQMNQSTSGSGTNESYSTNEVSASTFFPR 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1224 675 ProSiteProfiles Protein kinase domain profile. 356 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1224 675 SMART serkin_6 356 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1224 675 MobiDBLite consensus disorder prediction 649 675 - -
Mibi03g1224 675 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Mibi03g1224 675 Gene3D Transferase(Phosphotransferase) domain 1 432 635 - -
Mibi03g1224 675 ProSiteProfiles Gnk2-homologous domain profile. 146 261 IPR002902 -
Mibi03g1224 675 FunFam cysteine-rich receptor-like protein kinase 10 432 635 - -
Mibi03g1224 675 Pfam Protein kinase domain 357 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1224 675 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 670 - -
Mibi03g1224 675 CDD STKc_IRAK 362 629 - -
Mibi03g1224 675 FunFam Cysteine-rich receptor-like protein kinase 25 148 261 - -
Mibi03g1224 675 ProSitePatterns Serine/Threonine protein kinases active-site signature. 477 489 IPR008271 GO:0004672|GO:0006468
Mibi03g1224 675 Gene3D Phosphorylase Kinase; domain 1 319 431 - -
Mibi03g1224 675 SUPERFAMILY Protein kinase-like (PK-like) 341 654 IPR011009 -
Mibi03g1224 675 Pfam Salt stress response/antifungal 185 257 IPR002902 -
Mibi03g1224 675 Pfam Salt stress response/antifungal 38 135 IPR002902 -
Mibi03g1224 675 FunFam Cysteine-rich receptor-like protein kinase 10 320 431 - -
Mibi03g1224 675 ProSiteProfiles Gnk2-homologous domain profile. 32 138 IPR002902 -
Mibi03g1224 675 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 31 138 - -
Mibi03g1224 675 Gene3D - 30 138 IPR038408 -
Mibi03g1224 675 Gene3D - 149 261 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1224 Mibi-ChrMibi03 28677323 28681240 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1224 7 675 Receptor kinase-like Gene Family AT4G05200 43.043 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g1224 Pkinase 2.1e-46 CL0016