Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1223 ATGTCATCTTCTCACACAACTTTGTTACTCTTGTACTTCATCTTCATTTTCTTCAGATTTTCTCCCATTGCTGTAGCACAAACCTTTTATCTTGACCATGATTGCTCTACCAACAAAACCTTCACTGCCAATAGTTCCTATCAATCAAAACTCACCACCATCTTCTCCACCTTAGCTTCCCAAAATGTCGAGTTCTACAACACCACCGTTTCTGGCTCCGGCGACACCGTGTATGGCCTCTTTATGTGCCGTGGCGATGTCTCTCTCCAAGTGTGCAGCCAATGTGTCACGGACGCAACCCAAAGGCTACATTCGTTGTGTCCAATTTCGAAGGAGGCCGTAATATGGTACAACGAGTGCATGCTTCGCTATTCAAACCACTCCTTCTTCTCTGAGGTGGCCTTGAGGCCAATAATGGGCCTATACAATGAAGCCAATGTGACCGATCAAGCAAGTTTCATGAAATTATTGTACAATGTTTTGAATGAAACGGCAGATGTGGCGGCGAAACATGCTTTAGGGAAGAAGAAGTATGCGACTAAAGAAGTGAACATTTCGGAGTCTCAAACTTTGTATTGTTTGACTCAGTGTACGCCAGATCTTTCTCCGGGAGATTGTAGGATGTGTTTGGATCGTGTGATTGGGAAACTTGGTTGGTGTTGTACGGGAAGTGTAGGAGGAAGAGTTCTAAATCCTAGTTGCAATTTTCGTTATGAATTGTATCCCTTTTATGGCCCCGGTGCTATTAATCCGTTGATAGCGCCGGCGCCGGCGCCGGTGGCTGCGATTTCTCCTCCAGCGAGTTCTTCAGACCCTCAAGTAAAAGAGAAAGGCCGATCATCTGCAACAAGCACTATTGTGATAGTTGTGGTTTCTATTACCGGTTCGGGGATACTTTTTGGTTTTGCTTACTATCTCTTTAGGAAGCAAATGAAGAAGAAACGTAGAGATGTTCTTCGACAAAAGTACTTTGGAAGTGAAGGCACAACTTTAGAGCCACTGCAGTTTAACTTGGCTACTATTGAAACTGCTACAAATCAATTTTCACATGAAAACAGTTTAGGCAAAGGTGGATTTGGACAAGTTTATAAGGGTATTCTTTCAAATGGCCAGGAAATAGCTGTAAAAAGACTTTCAAAAGTTTCTGTCCAAGGTGCAGAAGAATTCAAAAATGAGGTTTTATTAATAGCAAAACTTCAGCACAGGAATTTGGTGGCTTTATTAGGATTCTGTATCGATGACCAAGAAAAAATACTAATTTATGAATATGTCCCCAACAGAAGCCTGGATTTCTTTCTATTTGATTCCCAAAATGGCAAAGTACTAACTTGGTTGGAGCGTTGTAAAATCATTGGAGGAGTTGCTCGAGGAATTCTTTATCTTCATGATTATTCTCGTCTGAAAATCATACATCGTGATCTTAAACCTAGCAATATTTTGTTAGATGATGAATTGAATCCAAAGATTTCAGATTTTGGCTTGGCCAAGATGGTTGCTATCAATGAAAATGAGGGAAATACTAATAGAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGTTTGGACAGTATTCTGAAAAGTCAGATGTCTTTAGTTTTGGAGTTATAATTTTAGAAATTATAAGTGGAAGGAAGAATAGAAGCCGTCATAATCAATCACAATATGCTGACAGCCTCTTAACCTATGCTTGGAAAAAATGGAATGAAGAAAAGTTCTTGGAGATATTGGATTCAAATCTTACAGAATTCGAATCATCTAATGAAATGATAAAGTGCATCCATATTGGTTTGTTATGTGTTCAAGAGAATCCAGATGCTAGGCCTTCCATGGCAACAATTATCCCATATCTTAGCGATGATTCAATTCAATTACCATTTCCACAAGAGCCTGCATTCTTTTTGCATGATCCAATGGAGCCTAACATTGAATCTCTAAGTGGAGAATCATGCTCTACCAATGAAGTGTCAAAGAGTGAATTCTTCCCTCGATAG 2001 0.3973 MSSSHTTLLLLYFIFIFFRFSPIAVAQTFYLDHDCSTNKTFTANSSYQSKLTTIFSTLASQNVEFYNTTVSGSGDTVYGLFMCRGDVSLQVCSQCVTDATQRLHSLCPISKEAVIWYNECMLRYSNHSFFSEVALRPIMGLYNEANVTDQASFMKLLYNVLNETADVAAKHALGKKKYATKEVNISESQTLYCLTQCTPDLSPGDCRMCLDRVIGKLGWCCTGSVGGRVLNPSCNFRYELYPFYGPGAINPLIAPAPAPVAAISPPASSSDPQVKEKGRSSATSTIVIVVVSITGSGILFGFAYYLFRKQMKKKRRDVLRQKYFGSEGTTLEPLQFNLATIETATNQFSHENSLGKGGFGQVYKGILSNGQEIAVKRLSKVSVQGAEEFKNEVLLIAKLQHRNLVALLGFCIDDQEKILIYEYVPNRSLDFFLFDSQNGKVLTWLERCKIIGGVARGILYLHDYSRLKIIHRDLKPSNILLDDELNPKISDFGLAKMVAINENEGNTNRIVGTYGYMSPEYAMFGQYSEKSDVFSFGVIILEIISGRKNRSRHNQSQYADSLLTYAWKKWNEEKFLEILDSNLTEFESSNEMIKCIHIGLLCVQENPDARPSMATIIPYLSDDSIQLPFPQEPAFFLHDPMEPNIESLSGESCSTNEVSKSEFFPR 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1223 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
Mibi03g1223 666 ProSiteProfiles Gnk2-homologous domain profile. 135 243 IPR002902 -
Mibi03g1223 666 FunFam cysteine-rich receptor-like protein kinase 10 424 627 - -
Mibi03g1223 666 ProSitePatterns Protein kinases ATP-binding region signature. 354 376 IPR017441 GO:0005524
Mibi03g1223 666 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 308 423 - -
Mibi03g1223 666 SUPERFAMILY Protein kinase-like (PK-like) 331 645 IPR011009 -
Mibi03g1223 666 Gene3D - 27 129 IPR038408 -
Mibi03g1223 666 Gene3D - 137 243 IPR038408 -
Mibi03g1223 666 ProSiteProfiles Gnk2-homologous domain profile. 29 129 IPR002902 -
Mibi03g1223 666 Pfam Salt stress response/antifungal 146 241 IPR002902 -
Mibi03g1223 666 Pfam Salt stress response/antifungal 35 126 IPR002902 -
Mibi03g1223 666 SMART serkin_6 348 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1223 666 FunFam Cysteine-rich receptor-like protein kinase 25 137 243 - -
Mibi03g1223 666 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 35 661 - -
Mibi03g1223 666 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 28 128 - -
Mibi03g1223 666 Gene3D Transferase(Phosphotransferase) domain 1 424 626 - -
Mibi03g1223 666 ProSiteProfiles Protein kinase domain profile. 348 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1223 666 Gene3D Phosphorylase Kinase; domain 1 308 423 - -
Mibi03g1223 666 Pfam Protein kinase domain 349 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1223 666 CDD STKc_IRAK 354 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1223 Mibi-ChrMibi03 28671231 28675807 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1223 1 659 Receptor kinase-like Gene Family AT4G05200 45.958 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g1223 Pkinase 2.4e-48 CL0016