Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1220 ATGATGTTCGTGCGGCCAGAAGGGAGCTTGATATCAGTTTCACCGGCAGTAGCAAACCTTGAAGTGACATCACCATCTTATATGCCTCTTATGGAAGATAATGCAGCTATGACTAAAGTTTCTGTTCCTTCATACAATGTACCTACAATTACAAAGAAAGATTTTCAACTGAAACGTAAACTTTCAAGTCCTGAATCAAGAGAAGATCTGGATTTGGAAGATGACAAAATTGAAGGATTAGAAACTGATGTTGAAAATTCTGAATCCTGTTTACAGCGGAAAACCTTTGGAGGATATAGTGAACCAAGTTGCAATTATGCTTCACATTTATGTGGTGTTAATAAGGAAATAAGTTTTGGTCCTTCCAGTTTATTTACAGATTTTGGAAAAGATGGGACTATTGACCAGCAGGGAGATTGCTTTGTTGAGAAGGCTAGTCATGATCAAAATTATATTAAGCATATTGGGCAGTTGAACATGCAATCAGAAGATGCTATCAGCCCAACAACATCAAGGCGTCCTTCTCCTGACTTGAGGACCAGAGATCTGCTTCCCTGTGATGAGATTAAAACTGGAAACAAGCATCATGCAAACATATGTGCTTTTTATGCCAAAGGATGGTGCATCAAGGGTAATTCTTGTAGTTTTGTTCATATAAAAGATCCTCAAAACAAATATGGTCAGCAAACTGAAGGAGAATTGGCCTCTCAAAATTGGAAGAGAGAAGTGCAACCAGAGGAAGGTAATGGAGATGATGTTAAGAGATCAAGGATGCCTTGCACTCAAGTTCCATGGGCTGCTACACAAGAAAGAATATCTCTGCATTCATCTGAATTTTCTTTAAACCCAATATTCCAGAAAGAAGTGGGCCCAAGCTGGCATGCAGATAAAAGCCGGTCTGTCTCTTCTTTCCCTTCCTCTCTAATCCATACAGAGGGAAAGCCTACCACTCAAGCTGAGAGTCATTCACCTAATTTAAACATGGCTACTCACCTTCCAACTACATGTATGTCACTGCCCCACCATATTCCTTCCCAGTCAGGATGTCCGTTGTCTTTTAGTGGATCCTTAAGTGAAAGTTCTGCAGATTCTCAACAACTTTTGAACGGAAGCATGGCATATCATGACATCAGATCCACTTTCTGTGGTTCCAAAAGGGAAGGTTTGGCTCTAAGTAGTTCATTTGGGGTTCTACCACACCCAAATGGGTGTAAATTAAAATTCTCTTCATGTGATTGGGAGCCATCTGTACCTTTCAAACCATCTTTTTTTATTACTTCTTCAAGTAGATCATCTGTAGAAGATCAAAAAGACCCTTTCTACAGTAGTGTGGAGATATCCAATATAGGGGATGGTTCCTTGAAAGCTTTCATTTTATCTCAAAGGTCATCCATTCAGACTTCATCTCAGGTTCCTGCAAATGGTGAATCTGTTGAAGCTGCAACTCAAGGATCTGATATTCATGGTGCCAAAAGTTCTGTATCTTCTCATAATAGATGTAATGACACTGAGCCAGAGAAGAGTTGTGTTCCTCATGAAAAAGGTTTGGTCACAACTGAAACGGATGGAATAGCAGTAGGATATCTAAATGGCCATGTTATAAAGGCTGGCACAGGACTCAATACCTATGAAGATGTTAAAAATATAGGAAAAGAAGAAACTGAGTGTGTTGCTAGACCTCAAGTTGAAGTAACAGAGTGCAAAAAACAAAGAGTAGATAGGGATAAGAAAAACAGTGAAATGGATTATAATCTTCAGAAGGATGTTGGCATGAAGATAGAATCAATGGAACTGAGAAATTTCCATTTTGCACTTGTTGATCATGTGAAAGTGATTTTAAGACCAGTTTGGCATGAGGGTCACCTCAGCAAGGATGCGCATAACATGATTGTTAAAAAATCAGTTCACAAGATTATTAGCACCTTACAGCCTCAGCAAATTCCACCAAATGAGGATTCTATCAAGAAGTACCTTTCTTTTTGTCATGTGAAAATTGCAAATCTGGTCAAGGATTATACCAGTATATATGGCCAGGTTTGA 2040 0.3902 MMFVRPEGSLISVSPAVANLEVTSPSYMPLMEDNAAMTKVSVPSYNVPTITKKDFQLKRKLSSPESREDLDLEDDKIEGLETDVENSESCLQRKTFGGYSEPSCNYASHLCGVNKEISFGPSSLFTDFGKDGTIDQQGDCFVEKASHDQNYIKHIGQLNMQSEDAISPTTSRRPSPDLRTRDLLPCDEIKTGNKHHANICAFYAKGWCIKGNSCSFVHIKDPQNKYGQQTEGELASQNWKREVQPEEGNGDDVKRSRMPCTQVPWAATQERISLHSSEFSLNPIFQKEVGPSWHADKSRSVSSFPSSLIHTEGKPTTQAESHSPNLNMATHLPTTCMSLPHHIPSQSGCPLSFSGSLSESSADSQQLLNGSMAYHDIRSTFCGSKREGLALSSSFGVLPHPNGCKLKFSSCDWEPSVPFKPSFFITSSSRSSVEDQKDPFYSSVEISNIGDGSLKAFILSQRSSIQTSSQVPANGESVEAATQGSDIHGAKSSVSSHNRCNDTEPEKSCVPHEKGLVTTETDGIAVGYLNGHVIKAGTGLNTYEDVKNIGKEETECVARPQVEVTECKKQRVDRDKKNSEMDYNLQKDVGMKIESMELRNFHFALVDHVKVILRPVWHEGHLSKDAHNMIVKKSVHKIISTLQPQQIPPNEDSIKKYLSFCHVKIANLVKDYTSIYGQV 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1220 679 MobiDBLite consensus disorder prediction 228 257 - -
Mibi03g1220 679 MobiDBLite consensus disorder prediction 295 324 - -
Mibi03g1220 679 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 169 677 - -
Mibi03g1220 679 MobiDBLite consensus disorder prediction 483 509 - -
Mibi03g1220 679 MobiDBLite consensus disorder prediction 483 499 - -
Mibi03g1220 679 MobiDBLite consensus disorder prediction 162 181 - -
Mibi03g1220 679 MobiDBLite consensus disorder prediction 296 324 - -
Mibi03g1220 679 ProSiteProfiles Zinc finger C3H1-type profile. 199 221 IPR000571 GO:0046872
Mibi03g1220 679 SUPERFAMILY CCCH zinc finger 194 218 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1220 Mibi-ChrMibi03 28587535 28589860 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mibi03g1220 None None None