Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1182 ATGGCACTTACAAGTGCTCCCAGTTCTTCTACTTCTTCAATGTCACCCATGAATTATCATGTTTTCTTAAGTTTCAGGGGAGAAGATACTCGCACAAATTTTGCTGATCATTTATACTCTGCATTACTCCGAAAGGGAGTTGTGACATTTAGGGATGATGAAAAACTTGAAAGAGGACAAGTTATTTCTGAGAAACTCATTGAAGCTATTGAGCAATCCCTTTTTTCCATTGTTATCCTCTCTCAAAATTATGCATCTTCCTCGTGGTGTTTGGATGAATTGGTGAAGATTATGGAATCCAAAAAATACTTGGGTCAAACAGTTTTTCCAGTTTTTTATGCTGTAGATCCATCTGATGTACGACACCAGAAAAAAAGCTTTGCCACAGCTTTTCAGAAACATGAAGTCGTTTTTTCAAATGATAAAGTTCGAAGATGGAGAGAAGCTTTAACTACAGTTGCTAATTTGTCTGGTTGGGACACCAGAAATAGACATGAAGCAGAGATTGTGGAACACATTGCCAAATTCATATGGAACAAATTATGTGATAAATTGCCATCAAGTTTTGAGCATTTAGTTGGAGATATTCAATCAAAGGCAGAGAGGATAATCTCCTTTTTAAACATAGGATTGGATGATAAATGCTTCATAGGGATATGGGGTATGGGTGGGATAGGGAAGACAACTATTGCTCGAGTTGTTTATGATTCTATCCGAATCAAATTTGATAACTGCTGTTTTCTTGCAAATGTAAGGGAAGATTCCAAAAGGGTTGGCTTGCCTGGTTTACAAAAGAAACTTCTTTCTTGTCTTGGACTAGGAGAACTAGAGATAAATGATTCCTTTCAGGGACAGGAAGTTATCAGAAATTTCTTGAGCAATAAGAAGGTTCTTGTTGTTCTTGATGATGTGAACCATAGAAGTCAATTAGATAATTTGGCTAGAGATAAAGAGTGGTTTGGTGCAGGGAGCAAATTAATTATAACTACTCGAGATATACAATTATTGACACAGTATGAGCAGTTTGTAGCATATGAAGTAGGGAGGTTACATCCAGATGAGTCCCTGAAACTCTTGTGTCAGAAAGCATTCAAAAACGATGAGCCAAACCAAGGTTTTTTGGATTTGTCCGGAGAAGTAGTTGAATATGCTCGCGGGCTTCCTCTGGCACTTGAAGTCTTAGGATCTTTTCTTTGTAGGAGAAAGCAATCTGAATGGAGAGACACATTAGAAAAACTGAGGCAAAATTTGCATCATGATATTTTAAATCAACTTCGCATCAGTTACGATGGATTAGAAGATGAAGAGTACAGGAATATATTTTTAGATATTGCATGTTTTTTTAATAAGGAGGCCAAATGTAAGGTCGTGAATATATTGAAAATATGTGGCCTGCATCCAATAATTGGAATTCAAGTTCTTATGGAAAAATCTTTGCTAGGTATCCTTGAATCAAATTTAAATTCAAGGAGAATTGCAGAATGTCATTATGATGATGTGCAAGATATTCTTAAAATGTTGAGAAGGGACATTTTCTTGCCAACTAATTTCTATGACACATTGCTTCTTGATGCTTCCAAAGAATATCTATATATGCATGATTTGCTTCAAGAGATGGGAAGAAGCATTGTTTTCCAAGAATCTCTTGGTGATGCTAGTCGACGCAGTAGATTGTGGTCTCTGGAGGACATTGATCTTGTGTTGAAAGGAGACAGGGGGACTGAAAACATTCAAAGTATATGTTTGGACATACAACTAGAATTTGAAGCAAAGTGGCACCCAGATTGCTTTTCAAAAATGCGAAATCTTAGAGTACTCAATTTAAGCAAGGTGCATCTTTTGCATCATCTCAATACTTTTCCAAGTGCATTGAAGCTTCTTATATGGGATCATTACGCTTTGGAATCTCTGCCTTCTTTCGATCAACTATATGAACTTGAGTGCCTTCAATTATGCAATAGCAAAATCAGAAAACTATGGAATGGAGCACCGTCTTTAGGTAAGCTGAGGATAATTGATTTGAGTGATTCTGATTGCCTAATTGGAACACCAGATTTCTCTGCAACACCAAATCTTGAAGAGCTGATCCTTACTCATTGTAGTAACCTAATTTGGATACATAAATCTGTCGGAAAGCTGAAGAAGTTGGTAAAATTACGCTTGGAATATTGCATAAATCTTCTAATACTTCCAAGTTATATGGAAACAATTAATCTGGAGGAGTTTATTCTTGGTGGTTGCATAAATCTTGTGGAGCTTCCTGAATTTGGCAGAAATATGACAAGTCTAGTCTTCTTGGATGTGAGGAGCACTGGAATCAAGAGGATTCCATCGTCCATAATTAATTCAATAAATCTTAAATACTTAGATGTGAGTGATTGCAACAAGCTCATATCATTGCCGGAGCTCCCTCCAAATTTGATTATATGTGGAAGTTATTGTCCCCTGTTGAAGGTTACAAGAACTCTCGAGCATCTATATGCCTCGCGTGTCTTTAAGGGTCCAGTTCATGTTTTCTATGACTACATGCACTATCCTTTTATGTGGAAGAGTGGAGTTCCAAGTTGGTTTAAAGAACACAAACATCGCCGGAGTAAGTGCAGCTCCGGTGAAGTTTCGTGGGATGTTGGTGGAGTTTGCAACGCAAGACTGATTCTTGAGCAAGATGGAACTCAACAAGCTTGGGCCTCGTTGCTCATATGTGTAGGTATGTATTGTTGTTTATAA 2727 0.3733 MALTSAPSSSTSSMSPMNYHVFLSFRGEDTRTNFADHLYSALLRKGVVTFRDDEKLERGQVISEKLIEAIEQSLFSIVILSQNYASSSWCLDELVKIMESKKYLGQTVFPVFYAVDPSDVRHQKKSFATAFQKHEVVFSNDKVRRWREALTTVANLSGWDTRNRHEAEIVEHIAKFIWNKLCDKLPSSFEHLVGDIQSKAERIISFLNIGLDDKCFIGIWGMGGIGKTTIARVVYDSIRIKFDNCCFLANVREDSKRVGLPGLQKKLLSCLGLGELEINDSFQGQEVIRNFLSNKKVLVVLDDVNHRSQLDNLARDKEWFGAGSKLIITTRDIQLLTQYEQFVAYEVGRLHPDESLKLLCQKAFKNDEPNQGFLDLSGEVVEYARGLPLALEVLGSFLCRRKQSEWRDTLEKLRQNLHHDILNQLRISYDGLEDEEYRNIFLDIACFFNKEAKCKVVNILKICGLHPIIGIQVLMEKSLLGILESNLNSRRIAECHYDDVQDILKMLRRDIFLPTNFYDTLLLDASKEYLYMHDLLQEMGRSIVFQESLGDASRRSRLWSLEDIDLVLKGDRGTENIQSICLDIQLEFEAKWHPDCFSKMRNLRVLNLSKVHLLHHLNTFPSALKLLIWDHYALESLPSFDQLYELECLQLCNSKIRKLWNGAPSLGKLRIIDLSDSDCLIGTPDFSATPNLEELILTHCSNLIWIHKSVGKLKKLVKLRLEYCINLLILPSYMETINLEEFILGGCINLVELPEFGRNMTSLVFLDVRSTGIKRIPSSIINSINLKYLDVSDCNKLISLPELPPNLIICGSYCPLLKVTRTLEHLYASRVFKGPVHVFYDYMHYPFMWKSGVPSWFKEHKHRRSKCSSGEVSWDVGGVCNARLILEQDGTQQAWASLLICVGMYCCL 908
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1182 908 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 444 IPR027417 -
Mibi03g1182 908 Pfam TIR domain 18 190 IPR000157 GO:0007165
Mibi03g1182 908 Gene3D - 182 344 IPR027417 -
Mibi03g1182 908 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 159 IPR035897 -
Mibi03g1182 908 FunFam Disease resistance protein (TIR-NBS-LRR class) 351 433 - -
Mibi03g1182 908 PRINTS Disease resistance protein signature 664 680 - -
Mibi03g1182 908 PRINTS Disease resistance protein signature 216 231 - -
Mibi03g1182 908 PRINTS Disease resistance protein signature 291 305 - -
Mibi03g1182 908 PRINTS Disease resistance protein signature 384 398 - -
Mibi03g1182 908 SMART till_3 18 156 IPR000157 GO:0007165
Mibi03g1182 908 FunFam Disease resistance protein (TIR-NBS-LRR class) 15 183 - -
Mibi03g1182 908 Gene3D - 349 433 IPR042197 -
Mibi03g1182 908 Pfam NB-ARC domain 199 419 IPR002182 GO:0043531
Mibi03g1182 908 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 812 IPR044974 GO:0006952
Mibi03g1182 908 SUPERFAMILY L domain-like 581 809 - -
Mibi03g1182 908 Gene3D - 16 181 IPR035897 -
Mibi03g1182 908 ProSiteProfiles TIR domain profile. 17 181 IPR000157 GO:0007165
Mibi03g1182 908 Gene3D Ribonuclease Inhibitor 576 736 IPR032675 -
Mibi03g1182 908 Gene3D Ribonuclease Inhibitor 737 812 IPR032675 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mibi03g1182 Mibi-ChrMibi03 27390162 27394195 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1182 15 801 WRKY Transcription Factor Family AT4G12020 30.693 9.80e-81 285