Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1170 ATGACAAAGCTCTCCTGTTTACTTGAACGATTCCGTGGAGAAGTGTTGAGGTGGAAGATGGAGATGCCATTTCTGAAACTGCTCTTCTTTTTTCTCCTTCTAATCTCCTTCAACTTTGTTGCTTCAGAAGTGGATGTACCTGTATACGTTGACCACAACTGCACAATTAATAACAACTTCACTTCCGATAGCTCCTACGGGTTCAACCTTAACACTCTCTTGCTTTCCTTGTATTTAAAGGCCGCGAATGATGCTCTTACTCCTGAATTCTACAACACCACCTTCTACACCAAAGACATGAACGACGCGGTATATGGAGAGTACATGTGCCGAGGTGACGTCCCCATTGACGTCTGTCGAGATTGCGTTCAGGATGCCACAAATAGAATAGCTTCAGAGTGTCCCAACAACAAAGAGGCAATTATATGGTACGAACAGTGCTTCCTCCGCTATTCCCACCGTTCTTTCTCCCCCTCCCTTGACATGCAGCCTACTGTTAGCATCTTCATCAGGAGCATGCCCGTGGGCTGTGATGATGAGATGAATCCAAAAATTTCTGATTTTGGCATGGCCAGAATGGTTGGCATTAATGAAACTAGAGGAAGCACAAATAGAATTGTGGGAACATTGGGTTACATGGCTCCAGAATACATTAAGTTTGGGCTATTTTCCGAAAAATCAGATGTTTTCAGCTATGGAGTTATTGTTTTAGAAATTATCAGTGGAAAGAGCATAAATTCTCAAAGTGAATCTCATGAATCTCAATATGATGGTGGACTTCTAAGTGATGCTTGGAATCATTGGAGAGACGAAAAATTGATAGAGATATTGGATTCAAATATAAGAGAAAGTGGGTCACACAATGAAATAATCAAATGCATACATATCGGCTTGTTGTGTGTTCAAGGAAATCCACAATTTAGGCCATCCATGAATGAAATTGTTCAATATATAAGCAGTGATTCAGTTCAAATGCCAACGCCTCAAGAACCAGCATTCTTCATGCATAATCAAATGGAACCAGATGCAATCACCAGAGCAATGAAGGCTCAACCTGGAAACCACAATCGATGTTCCATCAACGAATTGTCGGAGAGTACATTATTTCCTCGCTAA 1116 0.4122 MTKLSCLLERFRGEVLRWKMEMPFLKLLFFFLLLISFNFVASEVDVPVYVDHNCTINNNFTSDSSYGFNLNTLLLSLYLKAANDALTPEFYNTTFYTKDMNDAVYGEYMCRGDVPIDVCRDCVQDATNRIASECPNNKEAIIWYEQCFLRYSHRSFSPSLDMQPTVSIFIRSMPVGCDDEMNPKISDFGMARMVGINETRGSTNRIVGTLGYMAPEYIKFGLFSEKSDVFSYGVIVLEIISGKSINSQSESHESQYDGGLLSDAWNHWRDEKLIEILDSNIRESGSHNEIIKCIHIGLLCVQGNPQFRPSMNEIVQYISSDSVQMPTPQEPAFFMHNQMEPDAITRAMKAQPGNHNRCSINELSESTLFPR 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1170 371 Gene3D Transferase(Phosphotransferase) domain 1 155 330 - -
Mibi03g1170 371 Pfam Salt stress response/antifungal 54 153 IPR002902 -
Mibi03g1170 371 Pfam Protein tyrosine and serine/threonine kinase 181 317 IPR001245 GO:0004672|GO:0006468
Mibi03g1170 371 Gene3D - 47 154 IPR038408 -
Mibi03g1170 371 MobiDBLite consensus disorder prediction 352 371 - -
Mibi03g1170 371 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 47 156 - -
Mibi03g1170 371 ProSiteProfiles Gnk2-homologous domain profile. 48 156 IPR002902 -
Mibi03g1170 371 ProSiteProfiles Protein kinase domain profile. 1 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1170 371 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 177 368 - -
Mibi03g1170 371 SUPERFAMILY Protein kinase-like (PK-like) 178 342 IPR011009 -
Mibi03g1170 371 SMART tyrkin_6 73 318 IPR020635 GO:0004713|GO:0006468
Mibi03g1170 371 MobiDBLite consensus disorder prediction 351 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1170 Mibi-ChrMibi03 26904406 26908392 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1170 160 350 Receptor kinase-like Gene Family AT4G23300 42.268 4.60e-48 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mibi03g1170 PK_Tyr_Ser-Thr 1.4e-16 CL0016