Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1168 ATGGAGAATAATGATAAAGAATATGATGTTTCTCTTGATGCTATGTTACTAGCAGGTGCGCAGCTTTATCCCGCAGTGTTAAATGCTGCCATTGAGCTTGACCTTTTTAAGATCATTGGTGAGGGAAGCCCTAAGGGCATGTCTCCCTCTGAAATTGCTTCACACCTCCCAAATCCTCATGCCGACACCGTTCCTCGCCTCGATCGGTTGTTGTTTTTGCTTACTACTCATTCTATTTTGACTTGTTTTCCTTCCAACAAGCTTCACGATGGTAGCACTGAGAGGCTTTATGCTCTATCCCCTACCGGAAAATACATGTTCCCTGATGAAGATGGAGTCTCTTATGCTTCAATCTCCAAATTAAACTACCATCCAACTTATGTAAGAGTTCGGGAAAACATCAAACAAGTGATAGTGGAGGAGGAAGAGGACCTATTCAAGAAAGTTAATGGGACTTCAATGTTTAAATATATGAAAAAAGATCCAACTTTGGATGCTCTTTTCCACAAGGCTATGGCTGATGTTTCATGCATGCACATGAAGCAAATCCTTGAGAAATACCAAGGATTTGAAGGAATATCAACATTAGTTGATGTTGCTGGTGGCATTGGCCAAAGCCTCAAAATGATCGTCTCTAGGTACCCTTTAATTCAAGGCATTAACTTTGATTTGCCACATGTTGTTCAGCATGCCCCATCCTACCCAGGAATCAAACATGTGGGAGGAAGTATGTTCGAAGGTGTCCCAGAAGGTGATGCTTTAATGATCAAGGCTACAACTCATAACTGGGCGGATGACAAATGCATACAAGTTCTGAAAAATTGTCACAAGTCCCTCAAGAAAGGTGGAAAACTTATTATTATTGACTTAATAATGCCGGAAATACCAACTGCAACTGATGGCCATAAATATGCTGCGATTGTTGACAACATGATGTTTCTGCAAGCTGGTGGGAAGGAAAGAACTGAGAAAGAATTTGAAGCACTAGGCAAAGCTTCTGGCTTTTCTACCTATCGTGTTGCTGCTCGTGTTTTCTCATCGGCTTTGGGTGTCATTGAGTTTTATAAATGA 1071 0.4118 MENNDKEYDVSLDAMLLAGAQLYPAVLNAAIELDLFKIIGEGSPKGMSPSEIASHLPNPHADTVPRLDRLLFLLTTHSILTCFPSNKLHDGSTERLYALSPTGKYMFPDEDGVSYASISKLNYHPTYVRVRENIKQVIVEEEEDLFKKVNGTSMFKYMKKDPTLDALFHKAMADVSCMHMKQILEKYQGFEGISTLVDVAGGIGQSLKMIVSRYPLIQGINFDLPHVVQHAPSYPGIKHVGGSMFEGVPEGDALMIKATTHNWADDKCIQVLKNCHKSLKKGGKLIIIDLIMPEIPTATDGHKYAAIVDNMMFLQAGGKERTEKEFEALGKASGFSTYRVAARVFSSALGVIEFYK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1168 356 CDD AdoMet_MTases 195 292 - -
Mibi03g1168 356 FunFam Caffeic acid 3-O-methyltransferase 1 106 - -
Mibi03g1168 356 Gene3D Vaccinia Virus protein VP39 107 356 IPR029063 -
Mibi03g1168 356 Pfam O-methyltransferase domain 135 336 IPR001077 GO:0008171
Mibi03g1168 356 PANTHER O-METHYLTRANSFERASE 15 345 IPR016461 GO:0008168
Mibi03g1168 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 341 IPR029063 -
Mibi03g1168 356 PIRSF O-mtase 1 356 IPR016461 GO:0008168
Mibi03g1168 356 Pfam Dimerisation domain 26 75 IPR012967 GO:0046983
Mibi03g1168 356 Gene3D - 1 106 IPR036388 -
Mibi03g1168 356 SUPERFAMILY "Winged helix" DNA-binding domain 7 111 IPR036390 -
Mibi03g1168 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 15 356 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1168 Mibi-ChrMibi03 26816670 26821916 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1168 9 356 Monolignol Biosynthesis Gene Families AT5G54160 46.571 5.15e-104 308