Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1163 ATGTCCACCATTCCTCTTTCTCTCCTCTTCCTTCTCCTCCTCCTCCTTCCCTCCATTATTCTCTCCCTCAACCAAGAAGGCCTTTACCTCTACCAATTCAAACTCTCCCTCGACGACCCTTCCTCCTCCCTCTCCTCCTGGAACCCCCGTGACGTCACCCCATGTGCCTGGTCCGGCGTCACGTGCACCACCACCACCTCCGTTAACTCCACCGTTAACTCCTCCGTCACCGTCACCCGCCTCGACCTCTCCAACACCAACATCGCCGGCCCCTTCACCCCCTCCATCCTCTGCCGTCTCCCTAACCTCTCCTTCATCTCCCTCTTCAACAACTCCATCAACCAATCCCTCCCCTCCGACATATCCACGTGTCACTCCCTCATCCACCTCGACCTCTCCCAGAATCTCCTCACTGGTGAACTACCACACACTCTTTCTCTCCTCCCTAACCTCCGTTACCTCGACTTAACCGGAAACAACTTCTCCGGCCCCATCCCCGAATCCTTCGGAACCTTCCAGAACCTCCACGTCATCTCCCTCGTCTCGAACCTTCTAGAAGGTACCATCCCCGCTTCCTTAGGGAACATCTCCACTCTAAAAATGCTCAACCTCTCTTACAACCCCTTTTACCCAGGTCGAATCCCACCTGAGATTGGGAACCTAACGAACCTCGAGGTGCTTTGGTTGACGCAATGTAATTTGGTTGGTACAATTCCTAGTGAGCTGGGGAAATTAAAAAAACTGAGGGATTTGGATTTGGCTTTTAACAATCTGTACGGCTCGATCCCTGTTTCGCTAATGGGGATGACGAGTTTGAACCAGATTGAGCTGTATAATAATTCTTTGTCTGGTGAGTTGCCACGTGGATGGGCGAATTTGACTTCATTGAGGCTGCTTGATGCTTCCATGAACCACTTGACTGGTACGATTCCTGATGATTTGTGTCGTTTGCCGTTGGAAAGTCTCAATCTTTATGAGAATAGGTTGGAGGGTGAGTTGCCTGAGAGTATAGCGGATTCGGAGAATCTCTATGAGCTGAGGTTGTTTGATAATCGGCTCTCCGGTAAGCTTCCGGCGAGGCTCGGCGAGAAATCGCCGTTGCGGTGGGTCGACGTTTCGACGAATCGGTTCTCCGGTGGGATTCCGGCGAGTTTGTGTGATCAGGGGCAGTTGGAGGAGCTTCTTGTGATATACAATTCGTTTTCCGGTGAGATCCCGGCGAGTTTGGGGATGTGCCAGAGCTTGACACGTGTCAGGCTTGGTTATAATCGGTTTTCTGGTGAGGTCCCTGCGGGTATTTGGGGGCTTCCTCATGTTTATCTTCTGGAGCTTGTTGATAATTCATTTTCTGGTGCTATTTCTTCAACTATTGCTGGGGCTGGGAATCTTTCGTTGTTGATTTTATCTAAGAATAATTTTAGTGGGGTGATTCCTGATGAGATTGGATGGTTGGAAAATCTTGAGGAATTTTCTGGGGGGGATAATAACTTCACTGGGTCGTTGCCTGATGGTATTGTGAATCTTGGGCAGCTTGGGACTCTTGATCTTCACAACAATAAGCTCTCTGGGCAGCTCCCAAAGGGAATCAGATCTTTGAAGAAGCTGAATGAGTTGAATTTGGCCAACAATGAGATTAATGGGAAGATTCCTGATGAAATTGGGAGTTTGTCTGTGCTTAATTTCCTTGATCTTTCCCACAATCAACTTTCTGGGAAAGTTCCTAGGGGATTGCAGAATCTGAAGCTGAATCAGCTGAATTTGTCTTATAATCGACTTTCTGGAGAACTTCCTCCTCAGTTGGCTAAGGATATGTTTAAGACAAGCTTTTTGGGTAACCCTGGTTTGTGTGGAGATCTGAAAGGTCTATGTGATGGTAGGAATGATGCTGGAAATGCAGGTTACATTTGGTTGCTTCGAGCTATGTTCATCGTGGCCACTTTGGTGCTTCTCATTGGTGTGGTCTGGTTCTATTTCAAGTACAGGAACTTCAAGAACGTGAGAAGAGGCGTTGACAAATCGAAATGGACTTTGATGTCGTTCCACAAACTGGGTTTCGGCGAGGAAGAGATCCTGAACTGCCTTGATGATGACAATGTGATAGGGACTGGATCATCAGGGAAAGTTTACAAGGTTGTACTTAGCAATGGGGAGGCAGTTGCTGTGAAGAAACTATGGGGAGGTGTCATGAAGGACATAGAGAGTGGCGATTTCGACAAGGGACAGGTTCGGGACAATGCTTTCGATGCTGAGGTCGAAACTCTTGGCAAAATTAGGCACAAGAACATTGTTAAGCTGTGGTGTAGCTGTACTACTAGGGACTGCAAGCTATTGGTGTATGAGTACATGCCTAATGGAAGTCTTGGAGATTTGCTGCATAGTAGTAAGGGTGGGTTGTTGGATTGGCCAACGAGGTATAAGATTGCAGTAGATGCTGCAGAAGGCCTCTCTTATTTGCATCACGACTGTGTTCCGCCGATTGTTCATAGGGACGTGAAATCCAACAATATCTTGTTGGATGGTGACTTTGGCGCGAGGGTTGCTGATTTTGGAGTTGCTAAGGTTGTTGAAACCACAGCTAAGGGAGCTAAATCCATGTCTGCCATTGCTGGGTCATGTGGGTACATAGCACCAGAGTATGCATACACGCTCAGAGTGAATGAGAAGAGTGACATTTATAGTTTTGGAGTTGTCATACTGGAGTTAGTTACAAGAAGGCGTCCGGTAGACCCGGAATTTGGGGAAAAGGACTTGGTTAAGTGGGTATGCACCACCATAGATCAGAAAGGTGTGGATCATGTACTTGACTCCAGTCTTGATTCTTGTTTCAAAGAAGAGATCTGTAAGGTCCTCAACATTGGCCTCATGTGCACTAGCCCTCTTCCGATCAACCGCCCCGCCATGAGAAGAGTGGTGAAGATGTTGCAAGAAGTAGGAGCAGACAGTAACCAAACAAAGGCGTTGAAGAAAGACGGGAAGTTGTCGCCATATTACTACGAAGATGGCTCTGATCATGGAAGTGTAGTTTAG 3027 0.477 MSTIPLSLLFLLLLLLPSIILSLNQEGLYLYQFKLSLDDPSSSLSSWNPRDVTPCAWSGVTCTTTTSVNSTVNSSVTVTRLDLSNTNIAGPFTPSILCRLPNLSFISLFNNSINQSLPSDISTCHSLIHLDLSQNLLTGELPHTLSLLPNLRYLDLTGNNFSGPIPESFGTFQNLHVISLVSNLLEGTIPASLGNISTLKMLNLSYNPFYPGRIPPEIGNLTNLEVLWLTQCNLVGTIPSELGKLKKLRDLDLAFNNLYGSIPVSLMGMTSLNQIELYNNSLSGELPRGWANLTSLRLLDASMNHLTGTIPDDLCRLPLESLNLYENRLEGELPESIADSENLYELRLFDNRLSGKLPARLGEKSPLRWVDVSTNRFSGGIPASLCDQGQLEELLVIYNSFSGEIPASLGMCQSLTRVRLGYNRFSGEVPAGIWGLPHVYLLELVDNSFSGAISSTIAGAGNLSLLILSKNNFSGVIPDEIGWLENLEEFSGGDNNFTGSLPDGIVNLGQLGTLDLHNNKLSGQLPKGIRSLKKLNELNLANNEINGKIPDEIGSLSVLNFLDLSHNQLSGKVPRGLQNLKLNQLNLSYNRLSGELPPQLAKDMFKTSFLGNPGLCGDLKGLCDGRNDAGNAGYIWLLRAMFIVATLVLLIGVVWFYFKYRNFKNVRRGVDKSKWTLMSFHKLGFGEEEILNCLDDDNVIGTGSSGKVYKVVLSNGEAVAVKKLWGGVMKDIESGDFDKGQVRDNAFDAEVETLGKIRHKNIVKLWCSCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGVAKVVETTAKGAKSMSAIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTRRRPVDPEFGEKDLVKWVCTTIDQKGVDHVLDSSLDSCFKEEICKVLNIGLMCTSPLPINRPAMRRVVKMLQEVGADSNQTKALKKDGKLSPYYYEDGSDHGSVV 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1163 1008 Pfam Leucine rich repeat 123 161 IPR001611 GO:0005515
Mibi03g1163 1008 SMART LRR_typ_2 508 531 IPR003591 -
Mibi03g1163 1008 SMART LRR_typ_2 532 556 IPR003591 -
Mibi03g1163 1008 SMART LRR_typ_2 148 174 IPR003591 -
Mibi03g1163 1008 SMART LRR_typ_2 293 317 IPR003591 -
Mibi03g1163 1008 SMART LRR_typ_2 100 124 IPR003591 -
Mibi03g1163 1008 SMART LRR_typ_2 221 245 IPR003591 -
Mibi03g1163 1008 SUPERFAMILY Protein kinase-like (PK-like) 688 975 IPR011009 -
Mibi03g1163 1008 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 199 976 - -
Mibi03g1163 1008 Gene3D Transferase(Phosphotransferase) domain 1 782 997 - -
Mibi03g1163 1008 Gene3D Ribonuclease Inhibitor 198 319 IPR032675 -
Mibi03g1163 1008 Pfam Protein kinase domain 697 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1163 1008 ProSitePatterns Protein kinases ATP-binding region signature. 700 723 IPR017441 GO:0005524
Mibi03g1163 1008 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 23 196 - -
Mibi03g1163 1008 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 782 991 - -
Mibi03g1163 1008 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Mibi03g1163 1008 FunFam Leucine-rich receptor-like protein kinase family protein 214 312 - -
Mibi03g1163 1008 SMART serkin_6 694 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1163 1008 SUPERFAMILY L domain-like 319 527 - -
Mibi03g1163 1008 ProSiteProfiles Protein kinase domain profile. 694 977 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1163 1008 Gene3D Ribonuclease Inhibitor 320 629 IPR032675 -
Mibi03g1163 1008 SUPERFAMILY RNI-like 80 603 - -
Mibi03g1163 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 826 838 IPR008271 GO:0004672|GO:0006468
Mibi03g1163 1008 Gene3D Phosphorylase Kinase; domain 1 678 781 - -
Mibi03g1163 1008 Gene3D Ribonuclease Inhibitor 23 192 IPR032675 -
Mibi03g1163 1008 FunFam Receptor-like protein kinase HSL1 678 781 - -
Mibi03g1163 1008 FunFam Receptor-like protein kinase HSL1 318 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1163 Mibi-ChrMibi03 26578658 26581917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1163 20 1008 Receptor kinase-like Gene Family AT1G28440 70.754 0.0 1425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mibi03g1163 Pkinase 7.8e-41 CL0016