Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1162 ATGAGCTTTCTTGCTGATCATATTGCTTATGATGTGGCCATCATTGTTCTATCTATATTTCTCTTTGTTCTGGCCATTGTTCTCTACTTCACATGCAAGAAGAAACCAGTTCAATCTGATATTGAAAAGCAACAAGAAGGAGGAGAAGTTGAAGATGAAGACATACAAAAAGCAGTGCCGGTGAAGATCTGTGGTCGTGCGTATTCATTAATGGACATTGATGCAGCAACTGATGGATTCAACCAGAGGAGAATAATGGCCAAAGATCTCACAGGAATTTTATATGCTGGTGTATTAGAAAATGGAGATCTTGTGGCAATTAAAAGGATTCATCCTCTTCTTGTTCTCAGAAATGCAGGATTGAGTGGCTTCTCATCAGTTATGAAATGCCTCTCTTCAGCTCAACATCCGAACATAGTTTCCATTATTGGGTTCTCAGAAGCACCAGGTGAGAGAATTATAGTGATGGAGTTTGTGGGCACATTAAGCTTAGAATTCTATCTTCATCAAAACCCAGATGGAAATTCACTCTTAGATTGGAATCAGAGATTGAAAATAGCAGCTGGAGCAGCAAGAGGACTTCGCTACCTTCATGAAATTGCTTCACCAAACATAGTTCATGGCTGTGTCAAATCCTCAAACATCCTAATAGACATAAACTTCAGTGCTAGGGTTTCTGAATATGGACTCAACTTTCTTGCTCCCCAAGAAAAAAGAACCCTATTAGGGTATGTGGATGAAGAGTATTGGATCACTAATAATGGAAGAGTAGCAGGAGGAGGTAGTTGCAAAGAGAGTGATATTTATGGGTTTGGAGTGGTTTTGTTGGAGCTTTTGAGTGGAAGAAGTTGTGAAGAAGGGTTGTTAGTGAAATGGGCATTGCCATTGATTAAAGAAATGAGGTATAGTGAAGTTTTTGACCCAAGGTTGGTGATTCCTTCAGAGATTAAGCCTTTGGTTAGGTTAGCCAAAGTTGCTTCAGCTTGTGTTGGTAATTCAAGAAAATGTAGACCTTCCATTTCTCAAGTGTCAAATATTTTGAACCATTTAGAGAGAGAGGTATGCTTTGTTACATCTCAACATTAG 1086 0.3904 MSFLADHIAYDVAIIVLSIFLFVLAIVLYFTCKKKPVQSDIEKQQEGGEVEDEDIQKAVPVKICGRAYSLMDIDAATDGFNQRRIMAKDLTGILYAGVLENGDLVAIKRIHPLLVLRNAGLSGFSSVMKCLSSAQHPNIVSIIGFSEAPGERIIVMEFVGTLSLEFYLHQNPDGNSLLDWNQRLKIAAGAARGLRYLHEIASPNIVHGCVKSSNILIDINFSARVSEYGLNFLAPQEKRTLLGYVDEEYWITNNGRVAGGGSCKESDIYGFGVVLLELLSGRSCEEGLLVKWALPLIKEMRYSEVFDPRLVIPSEIKPLVRLAKVASACVGNSRKCRPSISQVSNILNHLEREVCFVTSQH 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1162 361 Gene3D Transferase(Phosphotransferase) domain 1 161 358 - -
Mibi03g1162 361 FunFam Receptor protein kinase CRINKLY4 159 354 - -
Mibi03g1162 361 Pfam Protein tyrosine and serine/threonine kinase 103 346 IPR001245 GO:0004672|GO:0006468
Mibi03g1162 361 PANTHER OS01G0253100 PROTEIN 63 351 IPR045271 -
Mibi03g1162 361 SUPERFAMILY Protein kinase-like (PK-like) 62 347 IPR011009 -
Mibi03g1162 361 ProSiteProfiles Protein kinase domain profile. 80 361 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mibi03g1162 361 Gene3D Phosphorylase Kinase; domain 1 41 158 - -
Mibi03g1162 361 FunFam serine/threonine-protein kinase-like protein ACR4 31 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1162 Mibi-ChrMibi03 26548758 26550897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1162 12 347 Receptor kinase-like Gene Family AT3G59420 34.463 2.82e-53 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Mibi03g1162 PK_Tyr_Ser-Thr 4.1e-21 CL0016