Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1161 ATGACATGGTGCAATAATGAGTCATCAGATGAAGAGGAGCTTAACGATAATAATAGTAATAATAAGGTGATTCAGATTATAAATAATAGTAATGATGATGAAGCTTCTGGAAATAATGAAGTCGGCGCAATAAAACCCTCTGAAATTCGAACCATTACTTGTCCTTCATGTGGCCATAATATTCAACTTCAAGATCAGGGTGGTGGGATTCATGAGCTTCCGGGGCTACCAGCTGGAGTGAAGTTTGATCCAAATGATATGGAGATATTGGAGCATTTAGAGGCCAAGGTTCTATCTGATGTTCGTAAGCTTCATCCTCTCATAGATGATTTCATTCCAACTCTTCAAGGTGAAAATGGCATCTGTTATACTCACCCTGAAAAGCTTCCAGGGGTGAGCAAAGATGGACAGGTTCGCCATTTCTTTCACAGGCCATCAAAAGCATACACAACAGGAACAAGAAAGAGAAGAAAGGTACACACAGATGAAGAAGGAAGCGAGACAAGGTGGCACAAAACAGGCAAAACAAGACCAGTCTTATGTAATGGTTCTATCAAAGGTTTCAAGAAAATCCTTGTCCTCTACACAAACTATGGAAGACAAAAGAAACCAGAGAAGACCAACTGGGTGATGCATCAATACCACCTTGGAACCAATGAGGAAGAGAAAGATGGAGAACTTGTTGTCTCCAAGGTTTTCTTCCAAACACAACCAAGACAATGTGGTAATTTGAAGGACCCAATATATGACCAAAAAATGATACTAAGCAATCATAATGATGATGATGTTATTCATGACAATACAACAACCTTATTAGGTAAAGAAGCAGCAGCTGCTTTTGTGGACTATTATAGTAATCCTCCTTACTTAAGTTATGACCATTTGGGTCATCATCATGGCAACTCAGAAAGCTCTCCTCAACTTATTCCCAACTTGGTTGTTCAAGGTGACCATGCTTCTTCCTTCATTCGTTTAACTATGGATCATTCCAACAAACCAAGACTTGACAGAAAAATATAG 1020 0.3912 MTWCNNESSDEEELNDNNSNNKVIQIINNSNDDEASGNNEVGAIKPSEIRTITCPSCGHNIQLQDQGGGIHELPGLPAGVKFDPNDMEILEHLEAKVLSDVRKLHPLIDDFIPTLQGENGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPVLCNGSIKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGTNEEEKDGELVVSKVFFQTQPRQCGNLKDPIYDQKMILSNHNDDDVIHDNTTTLLGKEAAAAFVDYYSNPPYLSYDHLGHHHGNSESSPQLIPNLVVQGDHASSFIRLTMDHSNKPRLDRKI 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1161 339 FunFam NAC domain-containing protein 73 85 239 - -
Mibi03g1161 339 MobiDBLite consensus disorder prediction 149 171 - -
Mibi03g1161 339 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 48 247 IPR044799 GO:0003700
Mibi03g1161 339 MobiDBLite consensus disorder prediction 155 171 - -
Mibi03g1161 339 Gene3D NAC domain 86 239 IPR036093 GO:0003677|GO:0006355
Mibi03g1161 339 SUPERFAMILY NAC domain 71 235 IPR036093 GO:0003677|GO:0006355
Mibi03g1161 339 Pfam No apical meristem (NAM) protein 77 216 IPR003441 GO:0003677|GO:0006355
Mibi03g1161 339 ProSiteProfiles NAC domain profile. 76 235 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1161 Mibi-ChrMibi03 26507469 26511447 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1161 1 330 NAC Transcription Factor Family AT1G28470 57.567 4.94e-121 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mibi03g1161 NAM 2.2e-21 No_clan