Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1131 ATGGCTTCTTCCAACAGACACTGGCCTAGCATGTTCAAATCCAAACCTTGCAATCCTCACCACCACCACCTTCCATGGCAGCCCTCCGACATGAACCCCTCCTCCCTCATCTCCTCTACCACCTCCCACCGTACCCCCTTCACCTCCTCCTCCACCACCTCAGGTTGTGAGGAGAGAAGTCCGGAGCCGAAGCCGAGGTGGAATCCAAAACCGGAACAGATTCGGATTCTGGAGGCAATATTCAACTCAGGGATGGTGAATCCTCCAAGGAATGAGATAAGGAAGATAAGAGCTCAGCTTGAAGAGTTTGGTCAAGTTGGTGATGCTAATGTTTTTTACTGGTTCCAGAATCGCAAGTCCAGAAGTAAACATAAGCTTCGCAATAATAATAACCTTCAAAACTCAAACAAGATTAACAAATCATCACCATCATCTCCTACTCTTCCTATTCCTCATCCTAAAACTACTCAGTTTTCTCCTTCTAATTCTTCATCTGATAATAATAATAACATTAAGGCTTCTTCTCCTAATTCTTCTTCTTCTTCTAATAAGGAAATGATTACTCTTCTTCCTCCTTCTCCTTTCTCCATTGTTAATGGCTTCTCTTCTGATATCATCCACCTCCCAACTTCTCCTACTAACCCCACCACATATTTTCATAATGACACTTCTCTTAATAATAATTCTGAGACCTTTTTCTTCCCTTCTTCTTCTTCTCATCAAGGGTTTTGCTTTTCTGAGTTGTCTGGTCTTGTTCAGCATCAAAATAATGTTGGGCCTTGCACTAGTCTCTTGCTCAGTGAGATGATGAATCAGAAGAAACAACAAGATCATCATAATAATAAGGATATGAAGAGTACTATAATGAATTATCCTCATCATCATCTTAGTTTCTGTGTGGCACCTCCTTCTTCTTCTTCCGTAACTCCCACTACTGTTCTGCCTACTTCTATGGTTACTGCAACAACAACCACCACCACTAGTAGTGTTACTGTTCCATCCCTTGTTTCTCAAATTCAAGGGGAAGAGGCCAGTGGTACGTCGGCAAAATCTATAGTATACATAAACGACGTCGCATTTGAGATTTCTGTGGGTCCCTTCAACGTGCATGCGGCTTTTGGTGAAGACGCGGTTCTGGTACACGCGGCAACAGGACACCCTGTCCTCACCAACGAGTGGGGTGTCACATTTCAGCCTCTCCACCACGGCGCATTTTATTATCTGGTGCGCACATATAGGAAAGAGAGAGTTGAAGGTAACGGGATTCAGATATATATGGAGTTCTCTTACTACCTCTCTCTGCTAGAGCATGTTCTTAATTATTAG 1326 0.4314 MASSNRHWPSMFKSKPCNPHHHHLPWQPSDMNPSSLISSTTSHRTPFTSSSTTSGCEERSPEPKPRWNPKPEQIRILEAIFNSGMVNPPRNEIRKIRAQLEEFGQVGDANVFYWFQNRKSRSKHKLRNNNNLQNSNKINKSSPSSPTLPIPHPKTTQFSPSNSSSDNNNNIKASSPNSSSSSNKEMITLLPPSPFSIVNGFSSDIIHLPTSPTNPTTYFHNDTSLNNNSETFFFPSSSSHQGFCFSELSGLVQHQNNVGPCTSLLLSEMMNQKKQQDHHNNKDMKSTIMNYPHHHLSFCVAPPSSSSVTPTTVLPTSMVTATTTTTTSSVTVPSLVSQIQGEEASGTSAKSIVYINDVAFEISVGPFNVHAAFGEDAVLVHAATGHPVLTNEWGVTFQPLHHGAFYYLVRTYRKERVEGNGIQIYMEFSYYLSLLEHVLNY 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1131 441 MobiDBLite consensus disorder prediction 122 186 - -
Mibi03g1131 441 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 410 IPR044557 GO:0003700|GO:0050793
Mibi03g1131 441 ProSiteProfiles 'Homeobox' domain profile. 60 125 IPR001356 GO:0003677
Mibi03g1131 441 MobiDBLite consensus disorder prediction 1 71 - -
Mibi03g1131 441 Gene3D - 63 132 - -
Mibi03g1131 441 SMART HOX_1 62 129 IPR001356 GO:0003677
Mibi03g1131 441 MobiDBLite consensus disorder prediction 28 58 - -
Mibi03g1131 441 FunFam WUSCHEL-related homeobox 11 64 131 - -
Mibi03g1131 441 MobiDBLite consensus disorder prediction 127 186 - -
Mibi03g1131 441 Pfam Homeodomain 64 124 IPR001356 GO:0003677
Mibi03g1131 441 SUPERFAMILY Homeodomain-like 59 127 IPR009057 -
Mibi03g1131 441 CDD homeodomain 63 125 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1131 Mibi-ChrMibi03 25473164 25476099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1131 1 409 Wox Gene Family AT2G33880 41.284 1.86e-80 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mibi03g1131 Homeodomain 1.7e-14 CL0123