Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi03g1129 | ATGGCGTCGTTACCTTCTTCCTCCCAAACTGAGCTTCTTCCTCTCAACCAAGATGACTCTCAAGACATGGTCATCTACCAAGTTCTCACCGAAGCCAACGCTCTTCCACCAAATTCTCACACTTCTACTGCTACACGAGTCCTTGGCCTTCATCATGGTCATGCCACCACTAAAGCCAGCAAGAAGCACTACCGGGGCGTGAGGAGGCGGCCGTGGGGGAAGTATGCGGCTGAGATCCGGGACTCGGCTCGCCATGGGGCTAGGTTGTGGCTTGGAACGTTTGAGACCGCGGAAGAAGCAGCCTTGGCTTATGATAGAGCTGCTTTTAGAATGAGAGGTTCTAAGGCTTTGCTTAATTTCCCTCCTGACTTTTTAGCTCCTTCTTCTTCTCCTATTCTCAACACAGAAAGACTGAATAACAAGGATTCTTCTGATTCTGATTCAATTTCTCTTGTTAGCTCATGTGTGAGTCCTGCTGAGAGTCGTAGTTGA | 492 | 0.4919 | MASLPSSSQTELLPLNQDDSQDMVIYQVLTEANALPPNSHTSTATRVLGLHHGHATTKASKKHYRGVRRRPWGKYAAEIRDSARHGARLWLGTFETAEEAALAYDRAAFRMRGSKALLNFPPDFLAPSSSPILNTERLNNKDSSDSDSISLVSSCVSPAESRS | 163 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi03g1129 | 163 | CDD | AP2 | 62 | 123 | IPR001471 | GO:0003700|GO:0006355 | |
| Mibi03g1129 | 163 | FunFam | Ethylene-responsive transcription factor 2 | 62 | 122 | - | - | |
| Mibi03g1129 | 163 | MobiDBLite | consensus disorder prediction | 136 | 163 | - | - | |
| Mibi03g1129 | 163 | Pfam | AP2 domain | 63 | 113 | IPR001471 | GO:0003700|GO:0006355 | |
| Mibi03g1129 | 163 | SUPERFAMILY | DNA-binding domain | 63 | 122 | IPR016177 | GO:0003677 | |
| Mibi03g1129 | 163 | PRINTS | Ethylene responsive element binding protein signature | 87 | 103 | IPR001471 | GO:0003700|GO:0006355 | |
| Mibi03g1129 | 163 | PRINTS | Ethylene responsive element binding protein signature | 64 | 75 | IPR001471 | GO:0003700|GO:0006355 | |
| Mibi03g1129 | 163 | Gene3D | AP2/ERF domain | 62 | 122 | IPR036955 | GO:0003700|GO:0006355 | |
| Mibi03g1129 | 163 | PANTHER | DNA-BINDING DOMAIN | 44 | 139 | IPR044808 | GO:0003700|GO:0009873 | |
| Mibi03g1129 | 163 | SMART | rav1_2 | 63 | 127 | IPR001471 | GO:0003700|GO:0006355 | |
| Mibi03g1129 | 163 | ProSiteProfiles | AP2/ERF domain profile. | 63 | 121 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi03g1129 | Mibi-ChrMibi03 | 25421652 | 25422143 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi03g1129 | 13 | 121 | AP2-EREBP Transcription Factor Family | AT4G17500 | 50.370 | 4.82e-38 | 129 |
Transcription factors information