Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1122 ATGACTATTCCTAAAGCACTTTCAAGATTTTGGCTGTTCTTTCTTCTGCTCATCTCTTCTTTTTTCTTACATGCCTATGGAGATGATGACACCAATGTTATACGCGTTGGTGCAATTATTGATGTTAACTCTCGTATTGGTAAAGAACAGCAAATAGCCATGGAAATTGGAGCTCAAAAATACAATAACACATCAAAGACTCATAAGCTGGCTCTTTATTTCAGGAACACCTCTGAGGAAGCCTTCAGAGTCGCCTCTCTTGCTAAAGAGTTGATTGAAGTGCAGAAAGCAGAAGTAATTATAGGGATGCATACATGGCAAGAAGCAGCTCTCGTGGCTGAAATTGGAAGCCAAGCTCAAGTTCCAATCATATCGTTTGTATCACCTGCAATAACCCCACCTTTGACACAAAAACGCTGGCCTTATCTGGTTAGACTAGCTAACAATGTCACAACACATGTGAAATGCATTTCAGATATAGTGAATGCTTTTAGTTGGCAAAGAGTGGTAGTAGTTTATGAAGAAGATGGCTATGTTGGTGGAGACTATGGGATGCTCTCTCTCCTTTCTGAGGCTCTTCAAGAGATTGGTTCGCAAATTGAATACCGTTTAGCACTACCACCAATTTCCTTTCTGCCAGATCCAGGAGAGCTAATCAATGAAGAGCTGATTAAGTTGGTAAAGCAAACTCAATCTCGTGCTTTCATTGTTTTGCACTCATCCTTAGAAATGGTGACTCATTTGTTCAGAGAAGCTTCAAAGAAGGGACTTGTGGATAAAGATTCGGCTTGGATAATCTCAGAGAGCACAACTAATTTGCTTGACTCTGTGGATAAGTCTGTTATCTCCTCCTATATGGGAGGGTCTTTGGGAATCAAGATGCATTACTCAGAAAATAGCAATGAGTATCATGACTTTCGAGCTCGGTTCCGGAAAGAATTCAGTGCAAAGAATCCTGAGGAAGATAATAGCAACCCGGGGTTTTATGCTTTGCAAGCTTATGATAGCATCACAGTTGTCATTCAAGCAGTAGAAAGAATAGCAAGGGGAAAAAATAGCAGCTCAAAAACTTTGCTAAGAGAAATACTGTCAAGTGGTTTCAATGGTTTAAGTGGGGAAATTCATTTTCAAGAAGGTCAGCTCTTACAGAATCCTATCCTAAGAATGGTTAATGTGGTTGGGAAGAGTTATAAAGAAATAGACTTTTGGACTCAAGAAAATGGGTTCACCACAAGCTTGCCTACAGGAAAAAGTGAAGATAATGCTACTGCTAGCACACAAAGTTTGGCTGGTGTAGTACAATGGCCAGGGAATTTGATGAGAACTCCAAAAGGTTGGAATATGCCTGTTAAGCAAAACCCAATGAAAATTGCAGTTCCAGGAAGAACTTCATTTTCAAAGTTTGTCAAGGTTGAGTACGGAAAAAGTCCAGATCAGAATCAATATAATGGATTCTGTATTGAGATCTTCCGCAAGATGCGTGAGCTTTTGGAATATGATCTTCCCTTCGAATTTTACCCCCGCAATGAAACTTATCCAGAACTGGTTCAACTTGTGTATAATAAGACTTATGATGCAGTGGTTGGTGACATGACCCTACTAGCAGAGAGGCTACAATATGTAGATTTTACTGTGCCATATGCAGAATCAGGATTGTCCATGATAGTTCCAGTGAAGTCTAAAGAATCAACATGGATGTTTCTAAAGCCATTCACCTGGCAAATGTGGGCGGTTACTGGTGCAATCTTGATTTACACCGTGTTGGTAGTTTGGTTCCTCGAACGAGTACCTAATCCAGAGTTTCAAGGCAATTTGAAGAGACAATTTAGCACTGCTCTTTGGTTTACATTCTCCTCCCTATTCTTTGCTCACAGGGAGCAAATGCATAGAAACTTATCTCGTGTGGTGATGGCAGCATGGCTTCTTCTAGTTATGGTTCTGAGCTCAAGTTACACAGCTAGCCTTTCATCAATGCTAACAGTTCAACAACTGCAGCCAAACGTCACAAGCATAGAGTGGCTGAAGATGAACAACATGAAAATTGGTTGTGATGGTGACTCATTTGTGAGGACATACCTAGAGAAAGTCGAAAAGTTTAAGCCAGAAAACATCATCAACATAAACAGCGAATACAATTATAATGGTGCATTCAAAAACAATTCAATAACAGCGGCTTTTCTTGAACTCCCTTATGAAAAAGTATACATAAGCACTTACTGCAAGGAGTATTCTGGCTCCACACCAACCACCAGATTTGGAGGCCTTGGCTTTATGCTCCAAAAAGGCTCCCCATTCGCCAGAGATTTTTCTAAAGCAATATTGCAGCTTTCAGAGGAGGGAGAACTAACCAACTTGGAAGCAAAATGGTTATATCACTCAAACGAGTGCACCAACAGCTCAAGCTCCAATGATACACAAAGTCTGAAGCTTGAAAGTTTCTGGGTTCTCTTTGTCATTTCTGGGGTCACGTCTACTATTTGTTTACTATTTTCTATCATTCAATCACTAGGATTTTGTCAGCTAACTCAAAATATGGCTCAAGTAGGCAATGAACCCACAAGCGATATGACAGCTTGGATAAGAACACTTGAATTAGCTAAGAGAATTTATAGTAGAAAACTTATTCAGGAAACTCATTTGTACGGGCCCAATATTGAGACACAACCAGATGTTACTGACTGTTCTTCCAGATGGGACTATGTCAGCACCACTGGTTCACCTGTACATCAACAAGATACAACATCCCCAGCGTCAACAGTTATTGTGCTCTCTTCACCACCACCAGACACACATATGGAAACCCCTGATAATAGATGA 2817 0.4036 MTIPKALSRFWLFFLLLISSFFLHAYGDDDTNVIRVGAIIDVNSRIGKEQQIAMEIGAQKYNNTSKTHKLALYFRNTSEEAFRVASLAKELIEVQKAEVIIGMHTWQEAALVAEIGSQAQVPIISFVSPAITPPLTQKRWPYLVRLANNVTTHVKCISDIVNAFSWQRVVVVYEEDGYVGGDYGMLSLLSEALQEIGSQIEYRLALPPISFLPDPGELINEELIKLVKQTQSRAFIVLHSSLEMVTHLFREASKKGLVDKDSAWIISESTTNLLDSVDKSVISSYMGGSLGIKMHYSENSNEYHDFRARFRKEFSAKNPEEDNSNPGFYALQAYDSITVVIQAVERIARGKNSSSKTLLREILSSGFNGLSGEIHFQEGQLLQNPILRMVNVVGKSYKEIDFWTQENGFTTSLPTGKSEDNATASTQSLAGVVQWPGNLMRTPKGWNMPVKQNPMKIAVPGRTSFSKFVKVEYGKSPDQNQYNGFCIEIFRKMRELLEYDLPFEFYPRNETYPELVQLVYNKTYDAVVGDMTLLAERLQYVDFTVPYAESGLSMIVPVKSKESTWMFLKPFTWQMWAVTGAILIYTVLVVWFLERVPNPEFQGNLKRQFSTALWFTFSSLFFAHREQMHRNLSRVVMAAWLLLVMVLSSSYTASLSSMLTVQQLQPNVTSIEWLKMNNMKIGCDGDSFVRTYLEKVEKFKPENIININSEYNYNGAFKNNSITAAFLELPYEKVYISTYCKEYSGSTPTTRFGGLGFMLQKGSPFARDFSKAILQLSEEGELTNLEAKWLYHSNECTNSSSSNDTQSLKLESFWVLFVISGVTSTICLLFSIIQSLGFCQLTQNMAQVGNEPTSDMTAWIRTLELAKRIYSRKLIQETHLYGPNIETQPDVTDCSSRWDYVSTTGSPVHQQDTTSPASTVIVLSSPPPDTHMETPDNR 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1122 938 Pfam Bacterial extracellular solute-binding proteins, family 3 479 790 IPR001638 -
Mibi03g1122 938 Gene3D - 739 798 - -
Mibi03g1122 938 Gene3D - 463 563 - -
Mibi03g1122 938 SMART GluR_14 456 792 IPR001320 GO:0015276|GO:0016020
Mibi03g1122 938 PIRSF IGluLR_plant 5 881 IPR017103 -
Mibi03g1122 938 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 35 833 - -
Mibi03g1122 938 CDD PBP1_GABAb_receptor_plant 35 413 IPR044440 -
Mibi03g1122 938 FunFam Glutamate receptor 153 324 - -
Mibi03g1122 938 Gene3D - 149 407 - -
Mibi03g1122 938 FunFam Glutamate receptor 450 564 - -
Mibi03g1122 938 Gene3D - 564 704 - -
Mibi03g1122 938 SUPERFAMILY Periplasmic binding protein-like I 32 446 IPR028082 -
Mibi03g1122 938 Pfam Receptor family ligand binding region 60 392 IPR001828 -
Mibi03g1122 938 Pfam Ligand-gated ion channel 791 822 IPR001320 GO:0015276|GO:0016020
Mibi03g1122 938 FunFam Glutamate receptor 564 702 - -
Mibi03g1122 938 SUPERFAMILY Periplasmic binding protein-like II 429 791 - -
Mibi03g1122 938 CDD GluR_Plant 453 790 - -
Mibi03g1122 938 Gene3D - 39 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1122 Mibi-ChrMibi03 25261066 25265503 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1122 1 829 Ion Channels AT2G29120 33.217 1.73e-146 457