Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1116 ATGAAGACTCGGTCCACCTCGACAACGATCATTGCATCAGACAAGCCAACTGGGATAGCTTCTAGCGGGGTGCAGCAGTGCCAATCTATAGATTCAATTATCGTTCCCACTTATGATGCGGTGGTTGGTGACATGACTCTACTAGCAGAGAGACTGCAATATGTGGATTTTACTGTGCCATATGCAGAATCAGGATTGTCCATGATAGTTCCAGTGAATTCTAAAGAATCAATATGGATGTTTCTAAAGCCATTCTCCTGGCAAATGTGGGTGGTTACTGGTGCAATCTTGATTTACACCGTGTTAGTTGTTTGGTACCTTGAACGAGTACCTAATCCAGAGTTTCAAGGCAATTTGAAGAAACAATTTAGCACTGCTCTTTGGTTTACCTTCTCCTCCCTATTCTTTGCTCACAAGGAGCAAATGCAGAGCAACTTATCTCGTGTGGTGATGGCAGCATGGCTTCTTCTAGTTATGGTTCTGACCTCAAGTTACACAGCTAGCCTTTCATCAATGCTAACAGTTCAACAACTGCAGCCAAACGTTACAAGCATAGAGTGGCTTAAGATGAACAACATGAAAATCGGCTGTGATGGTGACTCATTTGTTAGGACATACCTAGAGAAAGTCGAAAAGTTCAAGCCAGAAAACATCATCAACATAAATAGCGAATACAATTATGATGGTGCATTCAAAAACAATTCAATAACAGCAGCTTTTCTTGAACTCCCTTATGAAAACGTATACATAAGTACTTACTGCAAGGGGTATTCTGGCTCCACACCAACCACCAGATTTGGAGGCCTCGGCTTTATGCTTCAAAAAGGCTCCCCATTTGCCAGAGATTTTTCTAAAGCAATATTGCAGCTTTCAGAGAAGGGAGAACTAAGCAACTTGGAAGCAAAATGGTTATATCACTCAAACGAGTGCACCAACAGCTCAAGCTCCAATGATACACAAAGCCTAAATCTTGAAAGTTTCTGGGTTCTATTTGTCATTTCTGGGGTGACGTCTACTATTTGTTTACTATTTTCTATCATTCAATCACTTGGATTTTGTCAGCTAACTCAAAATATGGCTCAAGTAGGCAATGAACCCACAAGTGATATGACAGCTTGGATAAGAACACTTGAATTAGCTAAGAGAATCTATGGCAGAAAACTTATTCAGGAAACTCATTTGTACGGGCCCAATATTGAGACACAACAAGATGGTACTGACTGTTCTTCCAGATGGGACTATGTCAGCACCACTGGTTCACCTGTACATCAACAAGATACAACATCCCCAGCGTCAACAGTTATTGTGCTCTCTTCACCACCACCAGACTCACAAATGGAAACCCCTGTTAATAGATGA 1359 0.4135 MKTRSTSTTIIASDKPTGIASSGVQQCQSIDSIIVPTYDAVVGDMTLLAERLQYVDFTVPYAESGLSMIVPVNSKESIWMFLKPFSWQMWVVTGAILIYTVLVVWYLERVPNPEFQGNLKKQFSTALWFTFSSLFFAHKEQMQSNLSRVVMAAWLLLVMVLTSSYTASLSSMLTVQQLQPNVTSIEWLKMNNMKIGCDGDSFVRTYLEKVEKFKPENIININSEYNYDGAFKNNSITAAFLELPYENVYISTYCKGYSGSTPTTRFGGLGFMLQKGSPFARDFSKAILQLSEKGELSNLEAKWLYHSNECTNSSSSNDTQSLNLESFWVLFVISGVTSTICLLFSIIQSLGFCQLTQNMAQVGNEPTSDMTAWIRTLELAKRIYGRKLIQETHLYGPNIETQQDGTDCSSRWDYVSTTGSPVHQQDTTSPASTVIVLSSPPPDSQMETPVNR 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1116 452 Pfam Bacterial extracellular solute-binding proteins, family 3 37 304 IPR001638 -
Mibi03g1116 452 SMART GluR_14 9 306 IPR001320 GO:0015276|GO:0016020
Mibi03g1116 452 Gene3D - 27 77 - -
Mibi03g1116 452 Pfam Ligand-gated ion channel 305 336 IPR001320 GO:0015276|GO:0016020
Mibi03g1116 452 SUPERFAMILY Periplasmic binding protein-like II 33 305 - -
Mibi03g1116 452 MobiDBLite consensus disorder prediction 418 452 - -
Mibi03g1116 452 Gene3D - 78 219 - -
Mibi03g1116 452 Gene3D - 255 312 - -
Mibi03g1116 452 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 37 347 - -
Mibi03g1116 452 FunFam Glutamate receptor 78 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1116 Mibi-ChrMibi03 25100198 25102346 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1116 38 356 Ion Channels AT2G17260 39.692 4.96e-71 239