Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1113 ATGACTATTCCTAAAGCACTTTCAAGATTTTGGCTGTTCTTTCTTCTGCTCATCTCTTCTTTTTTCTTACATGCCTATGGAGATGATGACACCAATGTTATACGCATTGGTGCAATTATTGATGTTAACTCTCGTATTGGTAAAGAACAGCAAATAGCCATGGAAATTGGAGCTCAAAAATACAATAACACATCAAAGACTCATAAGCTGGCTCTTTATTTCAGGAACATCTCTGAGGAAGCCTTCAGAGTCGCCTCTCTTGCTAAAGAGTTGATTGAAGTGCAGAAAGCAGAAGTAATTATAGGGATGCATACATGGCAAGAAGCAGCTCTGGTGGCTGAAATTGGAAGCCAAACTCAAGTTCCAATCATATCCTTTGTATCACCTGCAATAACCCCACCTTTGACACAAAAACGCTGGCCTTATCTGGTTAGACTAGCTAACAATGTCACTGCAGATGTAAAATGCATTTCAGATATAGTGAATGCTTTCAGTTGGCAAAGAGTGGTAGTAGTTTATGAAGAAGATGGCTATGTTGGTGGAGACTATGGGATGCTATCTCTCCTTTCTGAGGCTCTTCAAGACATTGGTTCACAAATTGAATACCGTTTAGCGCTACCACCAATTTCCTTAATGCCAGATCCAGAAGAGCTAATCAATGAAGAGCTGATTAAGTTGGTAAAGAAAACTCAATCTCGTGTTTTCATTGTTTTGCACTCATCCTTAGAAATGGTGACTCATTTGTTCAGAGAAGCTTCAAAGATGGGACTTGTGGATAAAGATTCAGCTTGGATAATCTCAGAGAGCACAACTAATTTGCTTGACTCTGTGGATAAGTCTGTTATCTCCTCCTATATGGGAGGGTCTTTGGGAATCAAGATGCATTACTCAGAAAATAGCAGTGAGTATCAAGACTTTCGAGCTCGGTTCCGGAAACAATTCCGTGCAAAGAATCCTGAGGAAGACAATAGCAACCCCGGGTTTCATGCTTTGCAAGCGTATGATAGCATCAAAGTTGTCATTCAAGCAGTAGAAAGAATGGCAAGGGAGAAAAGTAGCAGCCCAAAAACTTTGCTAAGAAATATACTGTCATGCAGTTTCAGTGGTTTAAGTGGGGAAATTCATTTTCAAGGAGGTCAGCTCTTGCAGAATCCTATCCTAAGAATAGTTAATGTGGTTGGGAAGAGTTATAAAGAAATAGACTTTTGGACTCAAGAAAATGGGTTCACCTCAAGTTTGCCTACAGGGAAAAGTGATGATAATGCTACTGCTAGCGCACAAAGTTTGGCTGGTGTGGTACAATGGCCAGGGAATTTGCTGAGAGCTCCAAAAGGTTGGAATATGCCTGTTAAGCAAAACCCCATGAAAATTGCAGTTCCAGGAAGAACTTCATTTTCAAAGTTTGTCAAAGTTGAGTATGGAAATAGTCGAGATCAGAATAAATATAGTGGATTCTGTATTGAGGTTTTCCACAAGATGCGTGAGCTTTTGGAATATGATCTTCCCTTCGACTTTTACCCCCGCAATGAAACTTATCCAGAACTGGTTCAACTTGTGTATAATAAGAGACTGCAATATGTGGATTTTACTGTGCCATATGCAGAATCAGGATTGTCCATGATAGTTCCAGTGAATTCTAAAGAATCAACGTGGATGTTTCTAAAGCCATTCTCCTTGCAAATGTGGGCAGTTACTGGTGCAATCTTGATTTACACCGTGTTAGTAGTTTGGTACCTTGAACGAGTACCTAATCCAGAGTTTCAAGGCAATTTGAAGAAACAATTTAGCACTGCTCTTTGGTTTACCTTCTCCTCCCTATTCTTTGCTCACAAGGAGCAAATGCAGAGCAACTTATCTCGGGTGGTGATGGCAGCATGGCTTCTTCTAGTTATGGTTCTGACCTCAAGTTACACAGCTAGCCTTTCATCAATGCTAACAGTTCAACAACTGCAGCCAAACATGCTTCAAAAAGGCTCCCCATTTGCCAGAGATTTTTCTAAAGCAATATTGCAGCTTTCAGAGAAGGGAGAACTAACCAACTTGGAAGCAAAATGGCTATATTACTCAAACGAGTGCACCAACAGCTCAAGCTCTAATGATACACAAAGTCTGAAGCTTGAAAGTTTCTGGGTTCTATTTGTCATTTCTGGGGTGACGTCTACTATCTGTTTACTATTTTCTATCATTCAATCACAAGGATTTTGTCAGCTAACTCAAAATATGGCTCAGTTAGGACATGAACCCACAAGTGATATGACAGCTTGGATAAGAACACTTGAATTAGCTAAGAGAATTTATAGCAGAAAACTTATTCAGGAAACTCATTTGTACGGGCCCAATATTGAGACACAACCAGATGTTACTAACTGTTCTTCCAGATGGGACTATGTCAGCACCACTGGTTCACCTGTACATCAACACGATACAGCATCCCCTGCGTCTACAGTTATTGTGCTCTCTTCACCACCACCAGACTCACAAATGGAAACCCCTGTTAATAGATGA 2505 0.4036 MTIPKALSRFWLFFLLLISSFFLHAYGDDDTNVIRIGAIIDVNSRIGKEQQIAMEIGAQKYNNTSKTHKLALYFRNISEEAFRVASLAKELIEVQKAEVIIGMHTWQEAALVAEIGSQTQVPIISFVSPAITPPLTQKRWPYLVRLANNVTADVKCISDIVNAFSWQRVVVVYEEDGYVGGDYGMLSLLSEALQDIGSQIEYRLALPPISLMPDPEELINEELIKLVKKTQSRVFIVLHSSLEMVTHLFREASKMGLVDKDSAWIISESTTNLLDSVDKSVISSYMGGSLGIKMHYSENSSEYQDFRARFRKQFRAKNPEEDNSNPGFHALQAYDSIKVVIQAVERMAREKSSSPKTLLRNILSCSFSGLSGEIHFQGGQLLQNPILRIVNVVGKSYKEIDFWTQENGFTSSLPTGKSDDNATASAQSLAGVVQWPGNLLRAPKGWNMPVKQNPMKIAVPGRTSFSKFVKVEYGNSRDQNKYSGFCIEVFHKMRELLEYDLPFDFYPRNETYPELVQLVYNKRLQYVDFTVPYAESGLSMIVPVNSKESTWMFLKPFSLQMWAVTGAILIYTVLVVWYLERVPNPEFQGNLKKQFSTALWFTFSSLFFAHKEQMQSNLSRVVMAAWLLLVMVLTSSYTASLSSMLTVQQLQPNMLQKGSPFARDFSKAILQLSEKGELTNLEAKWLYYSNECTNSSSSNDTQSLKLESFWVLFVISGVTSTICLLFSIIQSQGFCQLTQNMAQLGHEPTSDMTAWIRTLELAKRIYSRKLIQETHLYGPNIETQPDVTNCSSRWDYVSTTGSPVHQHDTASPASTVIVLSSPPPDSQMETPVNR 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1113 834 FunFam Glutamate receptor 153 324 - -
Mibi03g1113 834 Gene3D - 451 549 - -
Mibi03g1113 834 PIRSF IGluLR_plant 5 656 IPR017103 -
Mibi03g1113 834 PIRSF IGluLR_plant 653 793 IPR017103 -
Mibi03g1113 834 CDD PBP1_GABAb_receptor_plant 35 413 IPR044440 -
Mibi03g1113 834 Pfam Ligand-gated ion channel 558 718 IPR001320 GO:0015276|GO:0016020
Mibi03g1113 834 Gene3D - 149 407 - -
Mibi03g1113 834 Gene3D - 36 385 - -
Mibi03g1113 834 Gene3D - 550 670 - -
Mibi03g1113 834 SUPERFAMILY Periplasmic binding protein-like II 429 688 - -
Mibi03g1113 834 SUPERFAMILY Periplasmic binding protein-like I 32 446 IPR028082 -
Mibi03g1113 834 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 655 729 - -
Mibi03g1113 834 FunFam Glutamate receptor 550 661 - -
Mibi03g1113 834 Pfam Receptor family ligand binding region 60 393 IPR001828 -
Mibi03g1113 834 SMART GluR_14 456 688 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1113 Mibi-ChrMibi03 25056000 25060317 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1113 657 725 Ion Channels AT2G29120 39.130 1.43e-06 50.1