Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1106 ATGAATTCAGATCGAAACCTTTTGCTTCTTTTTGCTGCGTTGAGTTCCATTCTCTTTCTCAATTGCTTCCCTGGAGCTAACGGAAGCAATATTGATGTTGGTGTAATTCTTGATGTCAATTCTCAAGTAGGAAAGCAACAGAAAGCAGCCATGGAAATTGCAGCTCAAAACTTTAACAATTATTCAAATAGCCTCACCATATCCCTCCATTTTCGTGACTCTCTAAGCAATCCATTGCAGGCGGCTTCAGCTGCTGAAGAGCTAATAAATAAAACGAAAGTGAAAGCCATCATTGGAATGGAGACATGGAAGGAAGCAGCTTTTGTAGTTGAAGTTGGAGATAAAGCTCAAGTTCCTATAATTTCATTCTCATCTCCATCAATATCCTCACCGCCTTCATCAATCCAATTTCGTTGGCCTTTTTTAATCCAAATGGCAAATAACCAAACAGCAAATATGAACTGCATAGCAGATATTCTTTATGCCTATAATTGGCAAAATGTTATAGCCATTTACGAAGATGATTCTTATAGTGCTGACTCTTCAGGCATGTTAACCCTCCTTTCAGAAGAACTCCTGAAGACTAATTCCCAAATTGAGCGTAGACTTATCCTCCCTCCATTTTCTTCTTTATCTGATCCAAAAGGGTTTGTTCTTGATGAACTAATTGACCTATTATTAACAGCAAAATCTAGGGTTTTCATTCTTCTCAAAGCATCATTGCCTATGGTGATCCATTTGTTCAGAGAAGCTAAGAAATTAGGGTTCTTAGGAAAAGATTCAGTTTGGATTATTAATGAAGATATTGCTGCCATGCTTGACTCTGTCAACGAGACTATTTTATCCTCCATGGAAGGTACTATTGGAATCAAAAGCTACTATTCTACTACTACAAGTGAATATACTCAATTCATAGATACAGTTCATCAAAACCAGTCTTCTAAGCCAGGATTCTATGCACTACAAGCTTATGATAGTATCGTGATGGTCACAAAAGCCCTAGAGAAAATGAATGGTAATAATAATTCAAGAGTGTTCATGGAGAAAATGTTGTCTAGCAACTTCAATGGTTTAACTGGTCACATAAGTTTCAAGGAAGGTCGTTTATCTCAGGCTCCATTGTTGAGAGTGATAAATGTGGTTAACAAGGAATACAAAGAATTGGACTTTTGGGAACCAAATTTGAAGTTCTTTAAATCCTTGCAAGATATAGAGAAAGGAAGTGAAGCTTCTGAAATTTATCTAAGTGGTCCAGTGGTTTGGCCTGGAGGACTTAAAACTGTTATAAACAATAATGAGAGTGTTCCATTAGGATGGAAGATACCTACGGTGAATGAGGCTTTGAAAGTAGCAGTTCCTGTGAATCCTGCTTTTGATAGTTTTGTGAAGAGAAACTCTAATGGGAAATATGTTGGTCTATGTATCGAAGTTTTTGAACATGTTCAAGAACAACTCAAACATAAGTACTCCGGTCTGCCATACAATTATACCCCTTTCCTTGTATCTTATGATGATCTGATACAAAATGTCGCCAACCAGACCTACGATGCTATTGTTGGGGACGTAACAATACTAGAGAGCAGATTAAAGGAAGTATCTTTCACACAGCCATATACAGAGTCAGGTTTATCACTCATAGTTCCAGCTGAGACAGAAGGCACTACATTTCTGTTCGTTAAGCCATTTAGCTGGCAAATGTGGCTTGCCACTGGTGCCATCTTCTTCTACACAACGCTTGCCATATGGTTCCTTGAGCATCCCTTAAACCCTAGCTATAAAGGATCATGGAAGAATCAATTCAGCAACACTTCTTGGTTTGCCTTTTCTTCCCTATTTTTTGCTCATGGGGGTCAAGTATACAGTAACTCAGCAAGAGTGGTAGTTGCTGTATGGCTATTTCTAGTGTTTGTTCTGACTTCAAGCTACACGGCAAGTCTTTCGTCAATGCTCACTGTGAAGCGCATGAACGGTGGGAGAAACGTTGAGTGGCTGAAGGAAAACAAGCTAAAAGTCGGTTGTGATAATAGCAGTCAGTTTGTGAAGGACTACTTGCTTTATGTCTATGATATACCTGAGAAACAAATCGTAAGTCTTGATGGTGAACATGACTTTGTGGACAAGTTCAAGAGCAAAGAAATTTCTGCTCTCTTCCTTGAGAGTCCTTATGAAAAGGTTTTCTTAGACAAGTATTGCAAACAATATACTGCAACTTCTTTTGGCTATAAATTTGGAGGCCTCGGCTTTGCATTCCAAAAAGGGTCTCCGCTGGCGAAGGACTTTTCTGAAGGCATTTTAAGTTTAGCAGAGAATGGAACTTTAAAGAGTTTGGAAAACAAATGGCTGACCCCTAATAACTGCTCAAGTAGTGACTCAAACTCTGGAACTGAAAGCCTAACCATAGCCGACTTTTGGGTTCTCTATGTGATATGTGGTCTGACTTCTACCATCTTCTTGATCATTGGTCTGTTCAGGAGTTACCTTCATCAAGAGAAAAAAGGTGATCAAGACAACAATAATAATACTATAGAAGCTTCCGATAACAATGGTGCTTTGAACAAGGCACTTGGGAGATTTACTTCAGGGCTTTACAACAATATTGGAAGTTTCAATTTCAACACTATATCAAGAGCTGCAACTTTTGGTGGAACAGAAAATGTTGGCCATTGGAATTCTTCTAGGTGGGAGAGTGTAAGAACTTATGAGGATCATGTTAATCCTAGACGCACCCAATCGGTTGGCTTAGAAGTGGTATAG 2754 0.3882 MNSDRNLLLLFAALSSILFLNCFPGANGSNIDVGVILDVNSQVGKQQKAAMEIAAQNFNNYSNSLTISLHFRDSLSNPLQAASAAEELINKTKVKAIIGMETWKEAAFVVEVGDKAQVPIISFSSPSISSPPSSIQFRWPFLIQMANNQTANMNCIADILYAYNWQNVIAIYEDDSYSADSSGMLTLLSEELLKTNSQIERRLILPPFSSLSDPKGFVLDELIDLLLTAKSRVFILLKASLPMVIHLFREAKKLGFLGKDSVWIINEDIAAMLDSVNETILSSMEGTIGIKSYYSTTTSEYTQFIDTVHQNQSSKPGFYALQAYDSIVMVTKALEKMNGNNNSRVFMEKMLSSNFNGLTGHISFKEGRLSQAPLLRVINVVNKEYKELDFWEPNLKFFKSLQDIEKGSEASEIYLSGPVVWPGGLKTVINNNESVPLGWKIPTVNEALKVAVPVNPAFDSFVKRNSNGKYVGLCIEVFEHVQEQLKHKYSGLPYNYTPFLVSYDDLIQNVANQTYDAIVGDVTILESRLKEVSFTQPYTESGLSLIVPAETEGTTFLFVKPFSWQMWLATGAIFFYTTLAIWFLEHPLNPSYKGSWKNQFSNTSWFAFSSLFFAHGGQVYSNSARVVVAVWLFLVFVLTSSYTASLSSMLTVKRMNGGRNVEWLKENKLKVGCDNSSQFVKDYLLYVYDIPEKQIVSLDGEHDFVDKFKSKEISALFLESPYEKVFLDKYCKQYTATSFGYKFGGLGFAFQKGSPLAKDFSEGILSLAENGTLKSLENKWLTPNNCSSSDSNSGTESLTIADFWVLYVICGLTSTIFLIIGLFRSYLHQEKKGDQDNNNNTIEASDNNGALNKALGRFTSGLYNNIGSFNFNTISRAATFGGTENVGHWNSSRWESVRTYEDHVNPRRTQSVGLEVV 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1106 917 Gene3D - 556 683 - -
Mibi03g1106 917 Pfam Ligand-gated ion channel 783 812 IPR001320 GO:0015276|GO:0016020
Mibi03g1106 917 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 841 - -
Mibi03g1106 917 FunFam Glutamate receptor 555 685 - -
Mibi03g1106 917 SUPERFAMILY Periplasmic binding protein-like I 25 392 IPR028082 -
Mibi03g1106 917 FunFam Glutamate receptor 152 317 - -
Mibi03g1106 917 PIRSF IGluLR_plant 1 865 IPR017103 -
Mibi03g1106 917 CDD PBP1_GABAb_receptor_plant 32 401 IPR044440 -
Mibi03g1106 917 Pfam Bacterial extracellular solute-binding proteins, family 3 452 782 IPR001638 -
Mibi03g1106 917 Pfam Receptor family ligand binding region 47 381 IPR001828 -
Mibi03g1106 917 Gene3D - 443 555 - -
Mibi03g1106 917 Gene3D - 726 788 - -
Mibi03g1106 917 Gene3D - 38 372 - -
Mibi03g1106 917 SMART AABind_6 447 784 IPR001638 -
Mibi03g1106 917 Gene3D - 148 394 - -
Mibi03g1106 917 SUPERFAMILY Periplasmic binding protein-like II 439 783 - -
Mibi03g1106 917 SMART GluR_14 447 783 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1106 Mibi-ChrMibi03 24928349 24933561 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1106 17 844 Ion Channels AT2G29120 31.236 4.55e-125 400