Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi03g1021 ATGTCAGAAGATGAGCACGAGATTTATGATGACAAAGATAAGTGTGAGGAAACTTCATTGGGTTCTTCTTCTCAGAAATGTTCATCGTTCGACTTGAATGAGGAAGCTACCAGTGAAGAAGAAGATGAAGAAGAACAAGAAGGAGAAGAGGAAGATCAAGAGAAGGAGAAAATAATAATGAAAGAAAATGAAGGCACTTCATCATCAACTAGAAGCATTACATCTACAGAACGAAATAATGAAGGAAAAAGCACAGTGAGGCAATATGTGAGATCCAAGATGCCTAGGCTTCGTTGGACTCCAGATCTTCATCTCTCTTTTGTTCATGCTGTTAAACGCCTTGGTGGTCAAGAGAGAGCAACACCCAAGTTGGTGCTTCAGCTAATGAATGTAAGAGGACTCAGCATTGCTCATGTGAAGAGTCACTTGCAGATGTATCGGAGCAAAAAACTTGATGAGGCTGGCCAAGTGATAAGATCCTCGCAAGTTGGTCGTATTTCTCAATTATCGTATCACTCAGTAAACACAAGGCAGCAATTCAAAATGGGAAACGGTGGAATTATTCTAACTACCAATTACAATGACCATGGCGGTTTCGTTCATAATCATCCTCTCTCCAAACCTTCTTTTACCTTTTCACACTCACATGCAATTTCGACAGATTCAAGGCACCAACAATGGCACTTGAGTAACCAGTGGTATAGAAGACAAACTTGCATGACAAACAACGAAGTGATGATGATGCCTTCAACGACAGATGGAATTGCACCAATGAGACCCAGCCAATTTCTTGAAGAGAAAAAGTGGCCTCCATTAGAAATTATTACTAATAAAAATAATAATCACCATAATTGGAAATTCAAGAAAACAATGCCTACGACGAGTGATATTATTAACACTTTGGCAGATACTAATAATAATAGTATTAATGATTTATCAAGTTCTGGATTTCACCAACTTGGCACTATGCATGCTCCTGTGGAAACACCTGATGATCAATGGAGTTTAGGAAATTTCAACAACACTAGCAACAACAGATTCAAGAGTTTGGAGCTAGAATTTGAACCCCCATTTCGAATTAAGTTAAATGAAGAGAAAGTGGAGAAAGATGAGCAATCGTTGCCTGATCTGCAACTGGGATTGACTTATCAGAATAATGTTGATCATTGCAAGGAGGCCCAAGAAATTAACACTAAGCTTTCCCTCTCTTAG 1212 0.3886 MSEDEHEIYDDKDKCEETSLGSSSQKCSSFDLNEEATSEEEDEEEQEGEEEDQEKEKIIMKENEGTSSSTRSITSTERNNEGKSTVRQYVRSKMPRLRWTPDLHLSFVHAVKRLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDEAGQVIRSSQVGRISQLSYHSVNTRQQFKMGNGGIILTTNYNDHGGFVHNHPLSKPSFTFSHSHAISTDSRHQQWHLSNQWYRRQTCMTNNEVMMMPSTTDGIAPMRPSQFLEEKKWPPLEIITNKNNNHHNWKFKKTMPTTSDIINTLADTNNNSINDLSSSGFHQLGTMHAPVETPDDQWSLGNFNNTSNNRFKSLELEFEPPFRIKLNEEKVEKDEQSLPDLQLGLTYQNNVDHCKEAQEINTKLSLS 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi03g1021 403 Coils Coil 33 56 - -
Mibi03g1021 403 MobiDBLite consensus disorder prediction 1 88 - -
Mibi03g1021 403 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 91 151 IPR017930 -
Mibi03g1021 403 FunFam Myb family transcription factor 93 151 - -
Mibi03g1021 403 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 74 213 - -
Mibi03g1021 403 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 95 150 IPR006447 GO:0003677
Mibi03g1021 403 SUPERFAMILY Homeodomain-like 93 149 IPR009057 -
Mibi03g1021 403 Gene3D - 94 151 - -
Mibi03g1021 403 MobiDBLite consensus disorder prediction 34 52 - -
Mibi03g1021 403 MobiDBLite consensus disorder prediction 63 87 - -
Mibi03g1021 403 Pfam Myb-like DNA-binding domain 97 147 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi03g1021 Mibi-ChrMibi03 21777204 21782564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi03g1021 22 156 G2-like Transcription Factor Family AT2G42660 57.353 3.88e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mibi03g1021 Myb_DNA-binding 8e-07 CL0123